Job Description P77650 Confidence 99.98% Date Thu Jan 5 12:31:22 GMT 2012 Rank 65 Aligned Residues 284 % Identity 15% Template c3r9uA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: thioredoxin-disulfide reductase from campylobacter jejuni. Resolution 2.36 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	.	.	.	.	.	E	R	P	P	L	S	K	S	M	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	V	H	L	H	S	G
Query Conservation																																									.	.	.	.	.
Alig confidence																										.	.														.	.	.	.	.
Template Conservation																										.	.
Template Sequence		L	D	V	A	I	I	G	G	G	P	A	G	L	S	A	G	L	Y	A	T	R	G	G	L	.	.	K	N	V	V	X	F	E	K	G	X	P	G	G	Q	I	T	S	S	S	E	I	E	N	Y	P	G	V	A	Q	V	X	D	G	I	S	F	X	A	P	W	S	E	Q	C	X	R	F	G	L	K	H	E	X	V
Template Known Secondary structure										S														T		.	.	S							S	S	S	T	T	G	G	G	G	G		S		B			S	T	T			S		B														T	T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		V	T	I	K	T	L	G	R	.	.	D	T	R	E	L	V	L	T	N	G	E	S	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	L	R	E	V	L	Q	P	E	R	S	V	V	I	I	G	A	G	T	I	G
Query Conservation										.	.
Alig confidence										.	.																																					.	.	.
Template Conservation																																																.	.	.
Template Sequence		G	V	E	Q	I	L	K	N	S	D	G	S	F	T	I	K	L	E	G	G	K	T	E	L	A	K	A	V	I	V	C	T	G	S	A	P	K	K	A	G	F	K	G	E	D	E	.	.	.	F	F	G	K	G	V	S	T	C	A	T	C	D	G	F	F	Y	K	N	K	E	V	A	V	L	G	G	G	D	T	A
Template Known Secondary structure										T	T	S							T	T	S																						B	T	T	T	T	.	.	.	T	B	T	T	T			S						G	G	G	G	T	T	S								B
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	.	.	.	.	.	.	K	V	E	L	T	L	Q	S	G	E	T	L	Q	A
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		L	E	E	A	L	Y	L	A	N	I	C	S	K	I	Y	L	I	H	R	R	D	E	F	R	A	A	.	.	.	.	.	.	P	S	T	V	E	K	V	K	K	N	E	K	I	E	L	I	T	S	A	S	V	D	E	V	Y	G	D	K	X	G	V	A	G	V	K	V	K	L	K	D	G	S	I	R	D	L	N	V
Template Known Secondary structure										T	T	S	S							S	S	S	S		B	S		.	.	.	.	.	.											T	T						S										T	T										T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		D	V	V	I	Y	G	I	G	I	S	A	N	E	Q	L	A	R	E	A	N	L	.	.	.	.	.	.	D	T	A	N	G	I	V	I	D	E	A	C	R	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	L	H	R	C	E	S	W	E	N	A	N	N	Q	A	Q	I	A	A	A
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		P	G	I	F	T	F	V	G	L	N	V	R	N	E	I	L	K	Q	D	D	S	K	F	L	C	N	X	E	E	G	G	Q	V	S	V	D	L	K	X	Q	T	S	V	A	G	L	F	A	A	G	D	L	R	K	D	A	P	.	.	.	.	.	.	.	.	K	Q	V	I	C	A	A	G	D	G	A	V	A	A	L
Template Known Secondary structure		S						S							G	G	G	B		T	T	S		B	S	S		B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B	T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.									.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		305	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		303	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions