Job Description P77650 Confidence 100.00% Date Thu Jan 5 12:31:22 GMT 2012 Rank 3 Aligned Residues 399 % Identity 32% Template c3lxdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: crystal structure of ferredoxin reductase arr from novosphingobium2 aromaticivorans Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		K	E	K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	K	S	M	L	L	E	D	S	.	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	V	H	L	H	S	G	V	T
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		E	R	A	D	V	V	I	V	G	A	G	H	G	G	A	Q	A	A	I	A	L	R	Q	N	G	F	E	G	R	V	L	V	I	G	R	E	P	E	I	P	Y	E	R	P	P	L	S	K	E	Y	L	A	R	E	K	T	F	E	R	I	C	I	R	P	A	Q	F	W	E	D	K	A	V	E	M	K	L	G	A	E
Template Known Secondary structure												S													T	T			S							S	S	S	S			B		S	G	G	G	G	T	T	T	T	T	T	S	S		S	G	G	G	B	S	S								T	T						T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		I	K	T	L	G	R	D	T	R	E	L	V	L	T	N	G	E	S	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	L	.	R	E	V	L	Q	P	E	R	S	V	V	I	I	G	A	G	T	I	G	L	E	L
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		V	V	S	L	D	P	A	A	H	T	V	K	L	G	D	G	S	A	I	E	Y	G	K	L	I	W	A	T	G	G	D	P	R	R	L	S	C	V	G	A	D	L	A	G	V	H	A	V	R	T	K	E	D	A	D	R	L	M	A	E	L	D	A	G	A	K	N	A	V	V	I	G	G	G	Y	I	G	L	E	A
Template Known Secondary structure							T	T	T	T					T	T	S																				B	T	T	S	S			B	T						S													T	T										S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	.	.	E	K	V	E	L	T	L	Q	S	G	E	T	L	Q	A	D	V	V	I	Y	G	I
Query Conservation																																																										.	.
Alig confidence																																																										.	.
Template Conservation
Template Sequence		A	A	V	L	T	K	F	G	V	N	V	T	L	L	E	A	L	P	R	V	L	A	R	V	A	G	E	A	L	S	E	F	Y	Q	A	E	H	R	A	H	G	V	D	L	R	T	G	A	A	M	D	C	I	E	G	D	G	T	K	V	T	G	V	R	M	Q	D	G	S	V	I	P	A	D	I	V	I	V	G	I
Template Known Secondary structure								T	T								S	S	S	S	T	T	T	T	T	S															T	T						T									S	S	S	B							S	S	S						S						S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		G	I	S	A	N	E	Q	L	A	R	E	A	N	L	D	T	A	N	G	I	V	I	D	E	A	C	R	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	.	.	L	H	R	C	E	S	W	E	N	A	N	N	Q	A	Q	I	A	A	A	A	M	L	G	L	P	L	P	L	L	P
Query Conservation																																																		.	.
Alig confidence																																																		.	.
Template Conservation
Template Sequence		G	I	V	P	C	V	G	A	L	I	S	A	G	A	S	G	G	N	G	V	D	V	D	E	F	C	R	T	S	L	T	D	V	Y	A	I	G	D	C	A	A	H	A	N	D	F	A	D	G	A	V	I	R	L	E	S	V	Q	N	A	N	D	M	A	T	A	A	A	K	D	I	C	G	A	P	V	P	Y	K	A
Template Known Secondary structure						S							T	T				S	S	S					T	T		B		S	S	T	T					G	G	G						G	G	G	T	T							S																T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		P	P	W	F	W	S	D	Q	Y	S	D	N	L	Q	F	I	G	D	M	R	G	D	.	D	W	L	C	R	G	N	P	E	T	Q	K	A	I	W	F	N	L	Q	N	G	V	L	I	G	A	V	T	L	N	Q	G	R	E	I	R	P	I	R	K	W	I	Q	S	G	K	T	F	D	A	K	L	L	I	D	E	N
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		T	P	W	F	W	S	N	Q	Y	D	L	K	L	Q	T	V	G	L	S	T	G	H	D	N	A	V	L	R	G	D	P	A	T	R	S	F	S	V	V	Y	L	K	G	G	K	V	V	A	L	D	C	V	N	M	V	K	D	Y	V	Q	G	K	K	L	V	E	A	R	A	Q	I	A	P	E	Q	L	A	D	A	G
Template Known Secondary structure										T	T										T	T		S								G	G	G	T									T	T									S															T									T		T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		395	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	K	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	L	K	E	M
Template Known Secondary structure		S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions