Job Description P77650 Confidence 99.96% Date Thu Jan 5 12:31:22 GMT 2012 Rank 75 Aligned Residues 279 % Identity 16% Template c3fbsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: the crystal structure of the oxidoreductase from agrobacterium2 tumefaciens Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		M	K	E	K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	K	S	M	.	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	V	H	L	H	S	G	V
Query Conservation																																																					.
Alig confidence				.																									.	.																							.
Template Conservation				.																									.	.
Template Sequence		M	K	.	F	D	V	I	I	I	G	G	S	Y	A	G	L	S	A	A	L	Q	L	G	R	A	R	K	.	.	N	I	L	L	V	D	A	G	E	R	R	N	R	F	A	S	H	S	H	G	F	L	G	Q	D	G	K	A	P	G	E	I	I	A	E	A	R	R	Q	I	E	R	Y	P	T	I	H	W	V	E	G
Template Known Secondary structure				.									S													T	T		.	.											T	T	T	T		S				S	S	T	T		T	T															T	T		T	T						S
Template Predicted Secondary structure				.																									.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		T	I	K	T	L	G	R	D	T	R	E	.	.	L	V	L	T	N	G	E	S	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	L	R	E	V	L	Q	P	E	R	S	V	V	I	I	G	A	G	T	I	G	L
Query Conservation													.	.
Alig confidence													.	.																																		.	.	.
Template Conservation																																																.	.	.
Template Sequence		R	V	T	D	A	K	G	S	F	G	E	F	I	V	E	I	D	G	G	R	R	E	T	A	G	R	L	I	L	A	M	G	V	T	D	E	L	P	E	I	A	G	L	R	E	R	.	.	.	W	G	S	A	V	F	H	C	P	Y	C	H	G	Y	E	L	D	Q	G	K	I	G	V	I	A	A	S	P	M	A	I
Template Known Secondary structure										T	T							T	T	T																						B	T	S	G	G	G	.	.	.	B	T	T	T			S						T	G	G	G	T										S	T	T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	K	V	E	L	T	L	Q	S	G	E	T	L	Q	A	D	V	V	I	Y	G	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																													.	.	.
Template Sequence		H	H	A	L	M	L	P	D	W	G	E	T	T	F	F	T	N	G	I	V	E	P	D	.	.	.	.	.	.	.	.	.	A	D	Q	H	A	L	L	A	A	R	G	V	R	V	E	T	T	R	I	R	E	I	A	G	H	A	D	V	.	.	.	V	L	A	D	G	R	S	I	A	L	A	G	L	F	T	Q	P
Template Known Secondary structure							G	G	G	T								T	T	T					.	.	.	.	.	.	.	.	.											T						S							T	T	T			.	.	.			T	T	S						S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																													.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		G	I	S	A	N	E	Q	L	A	R	E	A	N	.	.	.	.	.	L	D	T	A	N	G	I	V	I	D	E	A	C	R	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	L	H	R	C	E	S	W	E	N	A	N	N	Q	A	Q	I	A	A	A	A	M
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.
Template Sequence		K	L	R	I	T	V	D	W	I	E	K	L	G	C	A	V	E	E	G	P	M	G	S	T	I	V	T	D	P	M	K	Q	T	T	A	R	G	I	F	A	C	G	D	V	A	R	P	A	.	.	.	.	.	.	.	.	.	G	S	V	A	L	A	V	G	D	G	A	M	A	G	A	A	A
Template Known Secondary structure								S						T							T	T								T	T	S	B		S	S	T	T					S	G	G	G		S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions