Phyre 2 alignment of P77650 with c3e1tA

Job Description P77650
Confidence 99.26% Date Thu Jan 5 12:31:22 GMT 2012

Rank 193 Aligned Residues 267

% Identity 12% Template c3e1tA_

PDB info PDB header:flavoprotein Chain: A: PDB Molecule:halogenase; PDBTitle: structure and action of the myxobacterial chondrochloren2 halogenase cndh, a new variant of fad-dependent halogenases

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	K	E	K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence	E	V	F	D	L	I	V	I	G	G	G	P	G	G	S	T	L	A	S	F	V	A	M	R	G	H	.	.	R	V	L	L	L	E	R	E	A	F	P	R	H	Q	I	G	E	S	L	L	P	A	T	V	H	G	I	C	A	M	L	G	L	T	D	E	M	K	R	A	G	F	P	I	K	R	G	G	T	F	R	W
Template Known Secondary structure											S												T	T	T		.	.							S	S		S	S				S			B							T	T					T	T							T	T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

													43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	E	R	P	P	L	S	K	S	M	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	V	H	L	H	S	G	V	T	I	K	T	L	G	R	D	T	.	.	.	.	.	.	.	R	E	L	V	L	T	N	G	E	S	W	H	W	D	Q
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence	G	K	E	P	E	P	W	T	F	G	F	T	R	H	P	D	D	P	Y	G	F	A	Y	Q	V	E	R	A	R	F	D	D	M	L	L	R	N	S	E	R	K	G	V	D	V	R	E	R	H	E	V	I	D	V	L	F	E	G	E	R	A	V	G	V	R	Y	R	N	T	E	G	V	E	L	M	A	H	A	R	F
Template Known Secondary structure	S	S		S	S						S	S	S	S	S	S	S	T	T					B																	T	T					S	S										T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
	84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

	104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	L	R	E	V	L	Q	P	E	R	S	V	V	I	I	G	A	G	T	I	G	L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence	I	V	D	A	S	G	N	R	T	R	V	S	Q	A	V	G	E	R	V	Y	S	R	F	F	Q	N	V	A	L	Y	G	Y	F	E	N	G	K	R	L	P	A	P	R	Q	G	N	I	L	S	A	A	F	Q	D	G	W	F	W	Y	I	P	L	S	D	T	L	T	S	V	G	A	V	V	S	R	E	A	A	E	A
Template Known Secondary structure							T	T		S	S	G	G	G	T							S	T	T											S					S	T	T		T	T	S							T	T									S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
	164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

	184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	K	V	E	L	T	L	Q	S	G	E	T	L	Q	A	D	V	V	I	Y	G	I	G	I	S	A	N	E	Q	L	A	R	E	A	N	L	D	T	A	N	G	I	V	I	D	E	A	C
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	I	K	D	G	H	E	A	A	L	L	R	Y	I	D	R	C	P	I	I	K	E	Y	L	A	P	A	T	R	V	T	T	G	D	Y	G	E	I	R	I	R	K	D	Y	S	Y	C	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	T	S	S												T	S								T	T						S	S	T	T	S	S						S						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

	264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	L	H	R	C	E	S	W	E	N	A	N	N	Q	A	Q	I	A	A	A	A	M
Query Conservation
Alig confidence																							.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence	S	F	W	K	N	G	M	A	L	V	G	D	A	A	C	F	V	D	P	V	F	S	.	.	.	.	S	G	V	H	L	A	T	Y	S	A	L	L	V	A	R	A	I
Template Known Secondary structure		S	B		S	S					G	G	G	T					S	T	T		.	.	.	.
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
	292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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