Return to main results Retrieve Phyre Job Id

Job DescriptionP77650
Confidence99.97%DateThu Jan 5 12:31:22 GMT 2012
Rank74Aligned Residues287
% Identity15%Templatec3d8xB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of saccharomyces cerevisiae nadph dependent2 thioredoxin reductase 1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.... .....50.........60.........70...
Predicted Secondary structure 



















.........











Query SS confidence 









































. . . . . . . . .




























Query Sequence  EKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYER. . . . . . . . . PPLSKSMLLEDSPQLQQVLPANWWQENNV
Query Conservation   
 






 


 

  
   
    




         .........  
                         
Alig confidence 
























..














.........




























Template Conservation    







 


 

  
   
 .. 
 


                                               
Template Sequence  HNKVTIIGSGPAAHTAAIYLARAEI. . KPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGT
Template Known Secondary structure 

STT
..



SSGGG

TT
GGGG
S

STT
TT
TT
Template Predicted Secondary structure 








..





















Template SS confidence 















































































   3......10.........20....... ..30.........40.........50.........60.........70.........80
 
   74.....80......... 90.........100.........110.........120.........130.........140.........
Predicted Secondary structure 




....





























Query SS confidence 















. . . .



























































Query Sequence  HLHSGVTIKTLGRDTR. . . . ELVLTNGESWHWDQLFIATGAAARPLPLLDALGERCFTLRHAGDAARLREVLQPERSVVI
Query Conservation         
        ....                                                            
Alig confidence 















....




















































.





Template Conservation                                                 
 
                       .   
 
Template Sequence  EIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFR. NKPLAV
Template Known Secondary structure 



SSSSTT
TTS









TTBTTTS
TTSGGGT.TS
Template Predicted Secondary structure 






























.

Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150... ......
 
   150.........160.........170.........180.........190.........200.........210...... ...220..
Predicted Secondary structure 





























.......
Query SS confidence 


































































. . . . . . .





Query Sequence  IGAGTIGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVVDGE. . . . . . . KVELTL
Query Conservation     
                                              

 
     
  
    .......      
Alig confidence 
































......



























.......





Template Conservation     
      
                      ......                                         
Template Sequence  IGGGDSACEEAQFLTKYGSKVFMLVRKDHLRAS. . . . . . TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKK
Template Known Secondary structure 
SSTTTSS
SSSS

S
......
TT
SSSSSTTT
Template Predicted Secondary structure 














......











Template SS confidence 















































































   160.........170.........180.........190.. .......200.........210.........220.........230...
 
   223......230.........240.........250...... ...260.........270.........280.........290.........300
Predicted Secondary structure 



















..



























Query SS confidence 

































. .











































Query Sequence  QSGETLQADVVIYGIGISANEQLAREANLDTANG. . IVIDEACRTCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQ
Query Conservation    
  
  
 

 
 
  
         
   
 ..
 

    
    


 

 
                 
   
 
Alig confidence 

































..
























........










Template Conservation                                   
          
    


 

 
    ........     
   
 
Template Sequence  NEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY. . . . . . . . RQAITSAGSGC
Template Known Secondary structure  T
S
S


GGGTTTS
B
TTS
B


TTS


SSTT
GGGG
SS
........

Template Predicted Secondary structure 



































........
Template SS confidence 















































































   234.....240.........250.........260.........270.........280.........290.... .....300.....
 
   301.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  IAAAAM
Query Conservation   

 

Alig confidence 





Template Conservation   

  
Template Sequence  MAALDA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   306...310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions