Job Description P77650 Confidence 99.19% Date Thu Jan 5 12:31:22 GMT 2012 Rank 204 Aligned Residues 236 % Identity 12% Template c3bnuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:polyamine oxidase fms1; PDBTitle: crystal structure of polyamine oxidase fms1 from2 saccharomyces cerevisiae in complex with bis-(3s,3's)-3 methylated spermine Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	K	S	M	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		A	K	K	K	V	I	I	I	G	A	G	I	A	G	L	K	A	A	S	T	L	H	Q	N	G	I	Q	.	D	C	L	V	L	E	A	R	D	R	V	G	G	R	L	Q	T	V	T	G	Y	Q	G	R	K	Y	D	I	G	A	S	W	H	H	D	T	L	T	N	P	L	F	L	E	E	A	Q	L	S	L	N	D
Template Known Secondary structure												B													T	T			.	S						S	S	S	S	S	B	T	T							G	G	G					S	S							T	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	N	V	H	L	H	S	G	V	T	I	K	T	L	G	R	D	T	R	E	L	V	L	T	N	G	E	S	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	L	R	E	V	L	Q	P	E	R	S	V	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	T	R	F	V	F	D	D	D	N	F	I	Y	I	D	E	E	R	G	R	V	D	H	D	K	E	L	L	L	E	I	V	D	N	E	M	S	K	F	A	E	L	E	F	H	Q	H	L	G	V	S	D	C	S	F	F	Q	L	V	M	K	Y	L	L	Q	R	R	Q	F	L	T	N	D	Q	I	R	Y	L	P
Template Known Secondary structure																		T	T	T				T	T		T	T	T																	S	S	S		S	S					B													G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	G	T	I	G	L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	K	V	E	L	T	L	Q	S	G	E	T	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	C	R	Y	L	E	L	W	H	G	L	D	W	K	L	L	S	A	K	D	T	Y	F	G	H	Q	G	R	N	A	F	A	L	N	Y	D	S	V	V	Q	R	I	A	Q	S	F	P	Q	N	W	L	K	L	S	C	E	V	K	S	I	T	R	E	P	S	K	N	V	T	V	N	C	E	D	G	T	V	Y	N
Template Known Secondary structure					G	G	G					T	B		T	T	T	S	B					S					S						S												T	S		G	G	G				S										T	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	V	I	Y	G	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	Y	V	I	I	T	V	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions