Job Description P77650 Confidence 99.91% Date Thu Jan 5 12:31:22 GMT 2012 Rank 92 Aligned Residues 274 % Identity 14% Template c2vq7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:flavin-containing monooxygenase; PDBTitle: bacterial flavin-containing monooxygenase in complex with2 nadp: native data Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	.	.	.	.	.	.	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.			.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		R	I	A	I	L	G	A	G	P	S	G	M	A	Q	L	R	A	F	Q	S	A	Q	E	K	G	A	E	I	P	.	.	E	L	V	C	F	E	K	Q	A	D	W	G	G	Q	W	N	Y	T	W	R	T	G	L	D	E	N	G	E	P	V	H	S	S	M	Y	R	Y	L	W	S	N	G	P	K	E	C	L	E	F
Template Known Secondary structure									S																T	T					.	.							S	S	S	S	S		G	G	G	S			S			S	B		T	T	S	S	B							T	T		B		S	S		G	G	G	S		B
Template Predicted Secondary structure																															.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
												49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																											.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																											.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	K	S	M	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	V	H	.	.	L	H	S	G	V	T	I	K	T	L	G	R	D	T	R	E	.	.	.	.	.	.	.	.	.	L	V	L	T	N	G	E	S	W	H	W	D	Q	L	F	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.																											.	.																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																											.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	Y	T	F	D	E	H	F	G	K	P	I	A	S	Y	P	P	R	E	V	L	W	D	Y	I	K	G	R	V	E	K	A	G	V	R	K	Y	I	R	F	N	T	A	V	R	H	V	E	F	N	E	D	S	Q	T	F	T	V	T	V	Q	D	H	T	T	D	T	I	Y	S	A	A	F	D	Y	V	V	C	C
Template Known Secondary structure		T	T	B							S	S				S	S		B																T		G	G	G				S										T	T	T	T									T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	L	R	E	V	L	Q	P	E	R	S	V	V	I	I	G	A	G	T	I	G	L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P
Query Conservation
Alig confidence					.																																																																												.
Template Conservation					.																																																																												.
Template Sequence		T	G	H	.	F	S	T	P	Y	V	P	E	F	E	G	F	E	K	F	G	G	R	I	L	H	A	H	D	F	R	D	A	L	E	F	K	D	K	T	V	L	L	V	G	S	S	Y	S	A	E	D	I	G	S	Q	C	Y	K	Y	G	A	K	K	L	I	S	C	Y	R	T	A	P	M	G	Y	K	W	P	E	.
Template Known Secondary structure				S	.	S	S								B	T	T	T	T			S					G	G	G				G	G	G	G	T	T								S	S													T	T		S							S	S	S								T	.
Template Predicted Secondary structure					.																																																																												.
Template SS confidence
		167	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																	.	.															.
Query SS confidence																																																																	.	.															.
Query Sequence		V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	K	V	E	L	T	L	Q	S	G	E	T	L	Q	A	D	V	V	I	Y	G	I	G	I	S	A	N	E	Q	L	A	R	E	A	N	.	.	L	D	T	A	N	G	I	V	I	D	E	A	C	R	.
Query Conservation																																																																	.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																															.	.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	W	D	E	R	P	N	L	V	R	V	D	T	E	N	A	.	.	.	Y	F	A	D	G	S	S	E	K	V	D	A	I	I	L	C	T	G	Y	I	H	H	F	P	F	L	N	D	D	L	R	L	V	T	N	N	R	L	W	P	L	N	L	Y	K	G	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												S	S			.	.	.			T	T	S						S													T	T	B		T	T	T						S		S	S		S	S			T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
																245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
				265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	L	H	R	C	E	S	W	E	N	A	N	N	Q	A	Q	I	A	A	A	A	M	L	G	L
Query Conservation		.	.
Alig confidence		.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		V	W	E	D	N	P	K	F	F	Y	I	G	M	Q	D	Q	W	Y	.	.	.	.	.	.	.	.	.	.	S	F	N	M	F	D	A	Q	A	W	Y	A	R	D	V	I	M	G	R
Template Known Secondary structure				T	T		T	T					S		S			S	S	.	.	.	.	.	.	.	.	.	.																	T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.											.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions