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Job DescriptionP77650
Confidence100.00%DateThu Jan 5 12:31:22 GMT 2012
Rank21Aligned Residues379
% Identity17%Templatec2c3dB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:2-oxopropyl-com reductase; PDBTitle: 2.15 angstrom crystal structure of 2-ketopropyl coenzyme m2 oxidoreductase carboxylase with a coenzyme m disulfide3 bound at the active site
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40........
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Query Sequence  KEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  REYDAIFIGGGAAGRFGSAYLRAMGG. . RQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKV
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BS

STT
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SSSSSSTSTTTSTT



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   42.......50.........60....... ..70.........80.........90.........100.........110.........
 
   4950.........60.........70.........80.........90.........100.........110.........120..
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Query Sequence  . . . . . . KSMLLEDSPQLQQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALG
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Template Sequence  VGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEA. . . AGKVFKAKNLILAVGAGPGTLDVPGVNA
Template Known Secondary structure 

TTS


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STTTTS
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   120.........130.........140.........150.........160........ .170.........180.........190......
 
   123......130.........140.........150.........160.........170.........180.........190.........200..
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Query Sequence  ERCFTLRHAGDAARLREVLQPERSVVIIGAGTIGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVR
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Template Sequence  KGVF. . . . DHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK. LIKDNETRAYVLDRMKEQGME
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STT

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TTT.T


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   197..200 .........210.........220.........230.........240.........250 .........260.........270.
 
   203......210...... ...220.........230.........240....... ..250.........260.........270...
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Query Sequence  ILLNNAIEHVVDGE. . . . . . KVELTLQSGETLQADVVIYGIGISANEQLAR. . . EANLDTANGIVIDEACRTCDPAIFAG
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Template Sequence  IISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAV
Template Known Secondary structure 
S

TTSBTT
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T

B
TTS
B


TTSB
SSTT
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   272.......280.........290.........300.........310.........320.........330.........340.........350.
 
   274.....280.........290.........300.........310.........320.........330........
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Query Sequence  GDVAITRLDNGALHRCESWENANNQAQIAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDMRGDD. . . . . . . . . . . . . . .
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Template Sequence  GDLIGGP. . . . . . . . . MEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPD
Template Known Secondary structure  GGGG
S
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SSS

TT

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   352...... .360.........370.........380.........390.........400.........410.........420..
 
   339340.........350.........360....... ..370.........380..... ....390 ...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . WLCRGNPETQKAIWFNLQNGVLIGAVTLN. . QGREIRPIRKWIQSGKTF. DAKLL. . IDE
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Template Sequence  TENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFL
Template Known Secondary structure  STTTT
SS
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TTTSTTTGGGG
TTT
BSS
TT
BTS


SS
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   423......430.........440.........450.........460.........470.........480.........490.........500..
 
   394.....
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Query Sequence  NIALKS
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Template Sequence  NPTHFI
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S

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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