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Job DescriptionP77650
Confidence99.43%DateThu Jan 5 12:31:22 GMT 2012
Rank163Aligned Residues206
% Identity21%Templatec1yvvB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:amine oxidase, flavin-containing; PDBTitle: x-ray structurure of p. syringae q888a4 oxidoreductase at2 resolution 2.5a. northeast structural genomics consortium3 target psr10.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40 .........50.........60.........70.......
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Query Sequence  TIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHL. . . . . . . PYERPPLSKSMLLEDSPQLQQVLPANWWQENNVHLHS
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Template Sequence  PIAIIGTGIAGLSAAQALTAAGH. . QVHLFDKSRGSGGRXSSKRSDAGALDXGAQYFTARDRRFATAVKQWQAQGHVAEW
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STT
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SSSSS
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B


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   4.....10.........20...... ...30.........40.........50.........60.........70.........80.
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  GVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALGERCFTLRHAGDAARLREVLQPERSVVIIGAGTIGL
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Template Sequence  TPLLYNFHAGRLSPSPDEQVRWVGKPGXS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   82.......90.........100.........110
 
   158.160.........170.........180.........190.........200.........210... ......220.........230......
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Query Sequence  ELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVV. DGEKVELTLQSGETLQADVVIYG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AITRAXRGDXPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVII
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S


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   111........120.........130.........140.........150......
 
   237.
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Query Sequence  IG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ATPAPQASTLLAAAPKLASVVAGVKXDPTWAVALAFETPLQTPXQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQ
Template Known Secondary structure 
S
GGGGTT
TT

SS

S
S


SSSGGGSTT


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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   239240.........250.........260.........270.........280.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ISANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDVAITRLDNGALHRC
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Template Sequence  WSRQNLDASREQVIEHLHGAFAELIDCTXPAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLSG. . . . . . . . .
Template Known Secondary structure  TTT

TT
SS




SSS



S
TTTT

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   237..240.........250.........260.........270.........280.........290.........300.......
 
   290.........300.......
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Query Sequence  ESWENANNQAQIAAAAML
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Template Sequence  . RVEGAWLSGQEAARRLL
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   308.310.........320....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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