Job Description P77650 Confidence 99.95% Date Thu Jan 5 12:31:22 GMT 2012 Rank 82 Aligned Residues 280 % Identity 15% Template c1x31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sarcosine oxidase alpha subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 Resolution 2.15 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	K	S	M	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	.	V	H	L	H	S	G	V	T	I	K	T
Query Conservation																																																																						.
Alig confidence																									.	.																																												.
Template Conservation																									.	.
Template Sequence		D	V	L	V	V	G	A	G	P	A	G	L	A	A	A	R	E	A	S	R	S	G	A	.	.	R	V	M	L	L	D	E	R	P	E	A	G	G	T	L	R	E	A	S	G	E	Q	I	D	G	I	D	A	A	Q	W	I	D	A	V	T	E	E	L	A	A	A	E	E	T	T	H	L	Q	R	T	T	V	F	G
Template Known Secondary structure									S													T	T		.	.							S	S	S	S	S		G	G	G	G	G			S				T	T																		T	T					S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.																		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	R	D	T	R	E	L	V	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	S	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	L	R	E	V	L	Q	P	E	R	S
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Template Conservation																																																																												.
Template Sequence		S	Y	D	A	N	Y	I	L	A	A	Q	R	R	T	V	H	L	D	G	P	S	G	Q	G	V	S	R	E	R	I	W	H	I	R	A	K	Q	V	V	L	A	T	A	A	H	E	R	P	I	V	F	E	N	N	D	R	P	G	I	M	L	A	G	S	V	R	S	Y	L	N	R	F	G	V	.	R	A	G	S	K
Template Known Secondary structure				T	T	T									S	T	T		S	S				T	T			S																									B	T	T	T	S	T	T																	.		S		S	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		V	V	I	I	G	A	G	T	I	G	L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	K	V	E	L	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	V	A	T	T	N	D	S	V	Y	P	L	V	S	E	L	A	A	S	G	G	V	V	A	V	I	D	A	R	Q	N	I	S	A	.	.	.	.	.	.	.	.	.	.	A	A	A	Q	A	V	T	D	G	V	T	V	L	T	G	S	V	V	A	N	T	E	A	D	A	S	G	E	L	S	A	V	L	V	A
Template Known Secondary structure							S	S	G	G	G								G	G	G	T			S						S	S	S				.	.	.	.	.	.	.	.	.	.								T	T					T	T										T	T	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320											.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
								221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																					.
Query SS confidence		.	.	.	.	.	.																																					.
Query Sequence		.	.	.	.	.	.	T	L	Q	S	G	E	T	L	Q	A	D	V	V	I	Y	G	I	G	I	S	A	N	E	Q	L	A	R	E	A	N	L	D	T	A	N	G	.	I	V	I	D	E	A	C	R	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	L	H	R	C	E	S	W	E
Query Conservation		.	.	.	.	.	.																																					.
Alig confidence		.	.	.	.	.	.																																					.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	D	E	Q	R	N	L	G	E	A	Q	R	F	E	A	D	V	L	A	V	S	G	G	F	N	P	V	V	H	L	H	S	Q	R	Q	G	K	L	N	W	D	T	S	I	H	A	F	V	P	A	D	A	V	A	N	Q	H	L	A	G	A	L	T	G	L	L	.	.	.	.	.	.	.	.	.	.	D	T	A
Template Known Secondary structure			B		T	T			B									S																		T	T							T	T	T	T						S			T	T					G	G	G	G	T			.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.											.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	N	N	Q	A	Q	I	A	A	A	A	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	L	S	T	G	A	A	T	G	A	A	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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