Job Description P77650 Confidence 100.00% Date Thu Jan 5 12:31:22 GMT 2012 Rank 64 Aligned Residues 290 % Identity 16% Template c1vdcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dependent thioredoxin reductase; PDBTitle: structure of nadph dependent thioredoxin reductase Resolution 2.50 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																															.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																															.	.	.	.	.	.	.	.	.
Query Sequence		M	K	.	.	E	K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	.	.	.	.	.	.	.	.	.	K	S	M	L	L	E	D	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q
Query Conservation				.	.																																															.	.	.	.	.	.	.	.	.
Alig confidence				.	.																										.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		L	E	T	H	N	T	R	L	C	I	V	G	S	G	P	A	A	H	T	A	A	I	Y	A	A	R	A	E	L	.	.	K	P	L	L	F	E	G	W	M	A	N	D	I	A	P	G	G	Q	L	T	T	T	T	D	V	E	N	F	P	G	F	P	E	G	I	L	G	V	E	L	T	D	K	F	R	K	Q	S	E
Template Known Secondary structure															S													T	T		.	.								S	S	B	T	T	B		T	T		G	G	G	G		S					S	T	T		T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		E	N	N	V	H	L	H	S	G	V	T	I	K	T	L	G	R	D	T	R	E	L	V	L	T	N	G	E	S	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	G	D	A	A	R	.	.	.	L	R	E	V	L	Q	P	E	R	S
Query Conservation																																																																					.	.	.
Alig confidence																																																																					.	.	.
Template Conservation
Template Sequence		R	F	G	T	T	I	F	T	E	T	V	T	K	V	D	F	S	S	K	P	F	K	L	F	T	D	S	K	A	I	L	A	D	A	V	I	L	A	I	G	A	V	A	K	R	L	S	F	V	G	S	G	E	V	L	G	G	F	W	N	R	G	I	S	A	C	A	V	C	D	G	A	A	P	I	F	R	N	K	P
Template Known Secondary structure			T	T														S	S	S	S						S	S																						B	T		S	S	S	S	S			B	T	T	T			S						T	T	S	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence		V	V	I	I	G	A	G	T	I	G	L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	.	.	.	.	.	.	.	.	.	K
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		L	A	V	I	G	G	G	D	S	A	M	E	E	A	N	F	L	T	K	Y	G	S	K	V	Y	I	I	H	R	R	D	A	F	R	A	S	K	.	.	.	.	.	.	I	M	Q	Q	R	A	L	S	N	P	K	I	D	V	I	W	N	S	S	V	V	E	A	Y	G	D	G	E	R	D	V	L	G	G	L	K	V
Template Known Secondary structure								S											T	T	T	S	S							S	S	S	S			S			.	.	.	.	.	.								T		T	T						S									S	S	S	S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																	.														.
Query SS confidence																																	.														.
Query Sequence		V	E	L	T	L	Q	S	G	E	T	L	Q	A	D	V	V	I	Y	G	I	G	I	S	A	N	E	Q	L	A	R	E	.	A	N	L	D	T	A	N	G	I	V	I	D	E	.	A	C	R	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	L	H	R	C	E	S	W	E	N	A
Query Conservation																																	.														.
Alig confidence																																	.														.																					.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		K	N	V	V	T	G	D	V	S	D	L	K	V	S	G	L	F	F	A	I	G	H	E	P	A	T	K	F	L	D	G	G	V	E	L	D	S	D	G	Y	V	V	T	K	P	G	T	T	Q	T	S	V	P	G	V	F	A	A	G	D	V	Q	D	K	K	Y	.	.	.	.	.	.	.	.	R	Q	A	I	T	A
Template Known Secondary structure				T	T	T									S						S					S		G	G	G	T	T	S	S		B		T	T	S		B				T	T	S		B		S	S	T	T					G	G	G	G		S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.									290	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	Q	A	Q	I	A	A	A	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	T	G	C	M	A	A	L	D	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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