Job Description P77650 Confidence 100.00% Date Thu Jan 5 12:31:22 GMT 2012 Rank 10 Aligned Residues 392 % Identity 18% Template c1nhqA_ PDB info PDB header:oxidoreductase (h2o2(a)) Chain: A: PDB Molecule:nadh peroxidase; PDBTitle: crystallographic analyses of nadh peroxidase cys42ala and cys42ser2 mutants: active site structure, mechanistic implications, and an3 unusual environment of arg303 Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		M	K	E	K	T	I	I	I	V	G	G	G	Q	A	A	A	M	A	A	A	S	L	R	Q	Q	G	F	T	G	E	L	H	L	F	S	D	E	R	H	L	P	Y	E	R	P	P	L	S	K	S	M	L	L	E	D	.	S	P	Q	L	Q	Q	V	L	P	A	N	W	W	Q	E	N	N	V	H	L	H	S	G	V
Query Conservation																																																									.
Alig confidence				.	.	.																																																			.
Template Conservation				.	.	.
Template Sequence		M	K	.	.	.	V	I	V	L	G	S	S	H	G	G	Y	E	A	V	E	E	L	L	N	L	H	P	D	A	E	I	Q	W	Y	E	K	G	D	F	I	S	F	L	S	S	G	M	Q	L	Y	L	E	G	K	V	K	D	V	N	S	V	R	Y	M	T	G	E	K	M	E	S	R	G	V	N	V	F	S	N	T
Template Known Secondary structure				.	.	.						S	S															T	T	S							S	S	S	S	S	S	B		G	G	G						T	T	S	S			G	G	G	S	B	S									T	T						T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																				.	.	.	.	.																																			.	.
Query SS confidence																				.	.	.	.	.																																			.	.
Query Sequence		T	I	K	T	L	G	R	D	T	R	E	L	V	L	T	N	G	E	.	.	.	.	.	S	W	H	W	D	Q	L	F	I	A	T	G	A	A	A	R	P	L	P	L	L	D	A	L	G	E	R	C	F	T	L	R	H	A	.	.	G	D	A	A	R	L	R	E	V	L	Q	P	E	R	S	V	V	I	I	G	A
Query Conservation																				.	.	.	.	.																																			.	.
Alig confidence																				.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		E	I	T	A	I	Q	P	K	E	H	Q	V	T	V	K	D	L	V	S	G	E	E	R	V	E	N	Y	D	K	L	I	I	S	P	G	A	V	P	F	E	L	D	I	P	G	K	D	L	D	N	I	Y	L	M	R	G	R	Q	W	A	I	K	L	K	Q	K	T	V	D	P	E	V	N	N	V	V	V	I	G	S
Template Known Secondary structure								T	T	T	T							T	T	T									S															S	T	T	T	T		B	T					S													T		T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	I	G	L	E	L	A	A	S	A	T	Q	R	R	C	K	V	T	V	I	E	L	A	A	T	V	M	G	R	N	A	P	P	P	V	Q	R	Y	L	L	Q	R	H	Q	Q	A	G	V	R	I	L	L	N	N	A	I	E	H	V	V	D	G	E	K	V	E	L	T	L	Q	S	G	E	T	L	Q	A	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	I	G	I	E	A	A	E	A	F	A	K	A	G	K	K	V	T	V	I	D	I	L	D	R	P	L	G	V	Y	L	D	K	E	F	T	D	V	L	T	E	E	M	E	A	N	N	I	T	I	A	T	G	E	T	V	E	R	Y	E	G	D	G	R	V	Q	K	V	V	T	D	K	N	A	Y	D	A	D	L
Template Known Secondary structure		S													T	T								S	S	S	S	T	T	T	T	T																T	T						S									S	S	B							S	S						S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																				.																																						.
Query SS confidence																				.																																						.
Query Sequence		V	I	Y	G	I	G	I	S	A	N	E	Q	L	A	R	E	A	N	.	L	D	T	A	N	G	I	V	I	D	E	A	C	R	T	C	D	P	A	I	F	A	G	G	D	V	A	I	T	R	L	D	N	G	A	L	H	.	R	C	E	S	W	E	N	A	N	N	Q	A	Q	I	A	A	A	A	M	L	G	L	P
Query Conservation																				.																																						.
Alig confidence																				.																																						.
Template Conservation
Template Sequence		V	V	V	A	V	G	V	R	P	N	T	A	W	L	K	G	T	L	E	L	H	P	N	G	L	I	K	T	D	E	Y	M	R	T	S	E	P	D	V	F	A	V	G	D	A	T	L	I	K	Y	N	P	A	D	T	E	V	N	I	A	L	A	T	N	A	R	K	Q	G	R	F	A	V	K	N	L	E	E	P	V
Template Known Secondary structure						S					S		G	G	G	T	T	T	S		B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B					G	G	G	T																					T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		311	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.																			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.
Predicted Secondary structure					.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence					.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		L	P	L	.	L	P	P	P	W	F	W	S	D	Q	Y	S	D	N	L	Q	F	I	G	D	M	R	G	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	L	C	R	G	N	P	E	T	Q	K	A	I	W	F	N	L	Q	N	G	V	L	I	G	A	V	T	L	N	.	.	.	Q
Query Conservation					.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence					.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		K	P	F	P	G	V	Q	G	S	S	G	L	A	V	F	D	Y	K	F	A	S	T	G	I	N	E	V	M	A	Q	K	L	G	K	E	T	K	A	V	T	V	V	E	D	Y	L	M	D	F	N	P	D	K	Q	K	A	W	F	K	L	V	Y	D	P	E	T	T	Q	I	L	G	A	Q	L	M	S	K	A	D	L
Template Known Secondary structure							B									T	T																	T												S	S		T	T		T	T												T	T	T		B									S	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	I	R	P	I	R	K	W	I	Q	S	G	K	T	F	D	A	K	L	L	I	D	E	N	I	A	L
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		T	A	N	I	N	A	I	S	L	A	I	Q	A	K	M	T	I	E	.	.	D	L	A	Y	A	D	F	F	F
Template Known Secondary structure		T	T											T	T		B			.	.				T
Template Predicted Secondary structure																				.	.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.