Return to main results Retrieve Phyre Job Id

Job DescriptionP52598
Confidence94.99%DateThu Jan 5 12:05:48 GMT 2012
Rank231Aligned Residues55
% Identity11%Templated2g9wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10........ .20.........30 .........40.........50.........
Predicted Secondary structure 

.

....







Query SS confidence 













.











. . . .




























Query Sequence  ERRQIILEMVAEKG. IVSIAELTDRMN. . . . VSHMTIRRDLQKLEQQGAVVLVSGGVQSP
Query Conservation 

   

  
    . 
 
 


  
 ....

  





  

  
 
 
  


   
Alig confidence 













.











....




























Template Conservation    
 


 


      
  

 
 
        


 
 
 

  

 
  

   
  
Template Sequence  DLERAVXDHLWSRTEPQTVRQVHEALSARRDLAYTTVXAVLQRLAKKNLVLQIRAHRYAP
Template Known Secondary structure  T
SS
TTT



TTS


Template Predicted Secondary structure 
















Template SS confidence 



























































   910.........20.........30.........40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions