Job Description P52598 Confidence 98.12% Date Thu Jan 5 12:05:48 GMT 2012 Rank 26 Aligned Residues 145 % Identity 16% Template c3cdkD_ PDB info PDB header:transferase Chain: D: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase PDBTitle: crystal structure of the co-expressed succinyl-coa2 transferase a and b complex from bacillus subtilis Resolution 2.59 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	K	A	A	I	G	K	L	A	A	S	L	V	Q	P	G	S	C	I	Y	L	D	A	G	T	T	T	L	A	I	A	Q	H	L	I	H	M	E	S	L	T	V	V	T	N	D	F	V	I	A	D	Y	L	L	D	N	S	N	C	T	I	I	H	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																				.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	R	K	R	M	V	K	R	A	V	Q	E	I	K	D	G	M	N	V	N	L	G	I	G	.	M	P	T	L	V	A	N	E	I	P	D	G	V	H	V	M	L	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	E	N	G	L	L	G	I	G	P	Y	P	L	E	G	T	E	D	A	D	L	I	N	A
Template Known Secondary structure													T	T			T	T							T	T	.	G	G	G	G	G	G	G	G			T	T								.	.	.	.	.	.	.	.	.	.	.	.	T	T	T										T	T				T	T		B		T
Template Predicted Secondary structure																											.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
						143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.
Predicted Secondary structure		.	.	.	.																																																			.	.	.	.	.																			.	.
Query SS confidence		.	.	.	.																																																			.	.	.	.	.																			.	.
Query Sequence		.	.	.	.	G	A	V	C	R	E	N	R	S	C	V	G	E	A	A	A	T	M	L	R	S	L	M	I	D	Q	A	F	I	S	A	S	S	W	S	V	R	G	I	S	T	P	A	E	D	K	V	T	V	K	.	.	.	.	.	R	A	I	A	S	A	S	R	Q	R	V	L	V	C	D	A	T	K	.	.	Y
Query Conservation		.	.	.	.																																																			.	.	.	.	.																			.	.
Alig confidence		.	.	.	.																																																			.	.	.	.	.																			.	.
Template Conservation
Template Sequence		G	K	E	T	I	T	E	V	T	G	A	S	Y	F	D	S	A	E	S	F	A	M	I	R	G	G	H	I	D	L	A	I	L	G	G	M	E	V	S	E	Q	G	D	L	A	N	W	M	I	P	G	M	V	K	G	M	G	G	A	M	D	L	V	N	G	A	K	R	I	V	V	I	M	E	H	V	N	S	K	V
Template Known Secondary structure		T	S		B																					T	T										S				T	T						S										T	T									S	S							S					B
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	A	T	W	L	A	L	P	L	S	E	F	D	Q	I	I	T	D	D	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	T	C	S	L	P	L	T	G	Q	K	V	V	H	R	L	I	T	D	L	A	V
Template Known Secondary structure			S	S			S			S	B	S	S			S					S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions