Job Description P52598 Confidence 97.64% Date Thu Jan 5 12:05:48 GMT 2012 Rank 48 Aligned Residues 92 % Identity 12% Template c2dbbA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	I	L	E	M	V	A	E	K	G	I	V	S	I	A	E	L	T	D	R	M	N	V	S	H	M	T	I	R	R	D	L	Q	K	L	E	Q	Q	G	A	V	V	L	V	S	G	G	V	Q	S	P	G	R	V	A	H	E	P	S	H	Q	V	K	T	A	L	A	M	T	Q	K	A	A	I	G	K	L	A	A
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		M	Q	L	V	K	I	L	S	E	N	S	R	L	T	Y	R	E	L	A	D	I	L	N	T	T	R	Q	R	I	A	R	R	I	D	K	L	K	K	L	G	I	I	R	K	.	F	T	I	I	P	D	I	D	K	L	G	Y	M	Y	A	I	V	L	I	K	S	K	V	P	S	D	A	D	K	V	I	S	E	I	S
Template Known Secondary structure												T	T										T	T	S																T	S	S			.							T	G	G	G	T											S	S												T
Template Predicted Secondary structure																																														.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		88	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	Q	P	G	S	C	I	Y	L	D	A	G
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		D	.	I	E	Y	V	K	S	V	E	K	G	V	G
Template Known Secondary structure		T	.		T	T								S	S
Template Predicted Secondary structure			.
Template SS confidence
		91		.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions