Return to main results Retrieve Phyre Job Id

Job DescriptionP52598
Confidence99.83%DateThu Jan 5 12:05:48 GMT 2012
Rank12Aligned Residues120
% Identity17%Templatec1uj6A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of thermus thermophilus ribose-5-phosphate isomerase2 complexed with arabinose-5-phosphate
Resolution1.74 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  TQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLDNSNCTIIHTGGAVCRENRSCVGEA
Query Conservation    
  

  
   
     



 


   
   
     







 

  
       
  


          
  
Alig confidence 


































...............





























Template Conservation    
  

  
   
 

  








   
  
...............
       
  
  
  
  
       

Template Sequence  SYKKEAAHAAIAYVQDGXVVGLGTGSTARYAVLEL. . . . . . . . . . . . . . . ARRLREGELKGVVGVPTSRATEELAKREGI
Template Known Secondary structure  TT

TT


S...............TTSS
S
SSTT
Template Predicted Secondary structure 







...............










Template SS confidence 















































































   7..10.........20.........30.........40. ........50.........60.........70.
 
   157..160.........170.........180.........190.. .......200.........210.
Predicted Secondary structure 
















.






Query SS confidence 



































.


















Query Sequence  AATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK. RAIASASRQRVLVCDATKY
Query Conservation 
   
     
 



  

   
        
  
.   
  
   




 

 
Alig confidence 



































.


















Template Conservation   
  
    








 

    



 
 

  

 

  
   




 

 
Template Sequence  PLVDLPPEGVDLAIDGADEIAPGLALIKGXGGALLREKIVERVAKEFIVIADHTKK
Template Known Secondary structure 
B



TT


SGGG

TTS
TGGGB
Template Predicted Secondary structure 




















Template SS confidence 























































   72.......80.........90.........100.........110.........120.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions