Job Description P52598 Confidence 91.44% Date Thu Jan 5 12:05:48 GMT 2012 Rank 287 Aligned Residues 133 % Identity 21% Template c1o57A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																													.	.	.	.	.	.								.	.	.
Query SS confidence																				.	.																													.	.	.	.	.	.								.	.	.
Query Sequence		M	I	P	V	E	R	R	Q	I	I	L	E	M	V	A	E	K	G	.	.	I	V	S	I	A	E	L	T	D	R	M	N	V	S	H	M	T	I	R	R	D	L	Q	K	L	E	Q	Q	.	.	.	.	.	.	G	A	V	V	L	V	S	.	.	.	G	G	V	Q	S	P	G	R	V	A	H	E	P	S	H	Q
Query Conservation																				.	.																													.	.	.	.	.	.								.	.	.
Alig confidence																				.	.																													.	.	.	.	.	.								.	.	.													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	R	R	S	G	R	L	V	D	L	T	N	Y	L	L	T	H	P	H	E	L	I	P	L	T	F	F	S	E	R	Y	E	S	A	K	S	S	I	S	E	D	L	T	I	I	K	Q	T	F	E	Q	Q	G	I	G	T	L	L	T	V	P	G	A	A	G	G	V	K	Y	I	P	K	M	K	Q	A	.	.	.	.
Template Known Secondary structure																	T	S	T	T			B									T	T																				T	T	S								S	T	T													.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																					.	.													.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence																					.	.													.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		V	K	T	A	L	A	M	T	Q	K	A	A	I	G	K	L	A	A	S	.	.	L	V	Q	P	G	S	C	I	Y	L	D	A	.	.	.	.	.	.	.	.	G	T	T	T	L	A	I	A	Q	H	L	I	H	M	E	S	L	T	V	V	T	.	.	.	N	D	F	V	I	A	D	Y	L	L	D	N	S	N	C
Query Conservation																					.	.													.	.	.	.	.	.	.	.																						.	.	.
Alig confidence		.	.	.	.																.	.													.	.	.	.	.	.	.	.																						.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	A	E	E	F	V	Q	T	L	G	Q	S	L	A	N	P	E	R	I	L	P	G	G	Y	V	Y	L	T	D	I	L	G	K	P	S	V	L	S	K	V	G	K	L	F	A	S	V	F	A	E	R	E	I	D	V	V	M	T	V	A	T	K	G	I	P	L	A	Y	A	A	A	S	Y	L	N	V
Template Known Secondary structure		.	.	.	.														T		G	G	G			T	T	T					T	T	T	T	T																T	T	T	S			S						T	T	T	T												T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		137	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	I	H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	V	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions