Job Description P52598 Confidence 96.86% Date Thu Jan 5 12:05:48 GMT 2012 Rank 113 Aligned Residues 101 % Identity 19% Template c1mkmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		M	I	P	V	E	R	R	Q	I	I	L	E	M	V	A	E	K	.	G	I	V	S	I	A	E	L	T	D	R	M	N	V	S	H	M	T	I	R	R	D	L	Q	K	L	E	Q	Q	G	A	V	V	L	V	S	G	G	V	Q	S	P	G	R	V	A	H	E	P	S	H	Q	V	K	T	A	L	A	M	T	Q	K
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		M	N	T	L	K	K	A	F	E	I	L	D	F	I	V	K	N	P	G	D	V	S	V	S	E	I	A	E	K	F	N	M	S	V	S	N	A	Y	K	Y	M	V	V	L	E	E	K	G	F	V	L	R	K	K	D	K	R	Y	V	P	G	Y	K	L	I	E	Y	G	S	F	V	L	R	R	F	N	I	R	D	I
Template Known Secondary structure			T	T															S	S		B									T	T																T	T	S					T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	A	I	G	K	L	A	A	S	L	V	Q	P	G	S	C	I	Y	L	D	A	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	H	D	H	L	V	D	I	M	K	R	T	G	E	T	V	H	L	I	L	K	D	G
Template Known Secondary structure												T	T		S									S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions