Job Description P0AA89 Confidence 100.00% Date Thu Jan 5 11:12:12 GMT 2012 Rank 10 Aligned Residues 154 % Identity 31% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	H	E	V	G	M	D	V	L	T	K	L	L	N	R	R	F	L	P	T	I	F	K	R	E	I	A	H	A	N	R	T	G	T	P	L	S	V	L	I	I	D	V	D	K	F	K	E	I	N	D	T	W	G	H	N	T	G	D	E	I	L	R	K	V	S	Q	A	F	Y	D	N	V	R	S	S	D	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	R	H	A	L	F	D	P	L	T	E	A	L	N	R	R	G	C	E	Q	A	M	R	D	S	V	T	A	A	Q	R	E	G	W	P	F	V	L	F	V	L	D	M	D	N	L	K	P	I	N	D	R	F	G	H	L	A	G	D	R	V	L	V	R	L	V	E	S	A	Y	G	W	L	G	A	Q	D	W	I
Template Known Secondary structure								B		T	T	T		S	B																			T												S	S																										T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	Y	G	G	D	E	F	I	I	V	L	T	E	A	S	E	N	E	T	L	R	T	A	E	R	I	R	S	R	V	E	K	T	K	L	K	A	A	N	G	E	D	I	A	L	S	L	S	I	G	A	A	M	F	N	G	H	P	D	Y	E	R	L	I	Q	I	A	D	E	A	L	Y	I	A	K	R	R	G	R
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	P	L	H	.	.	.	.	.	.	.	.	.	.	.	V	S	A	G	S	A	V	C	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F	S	G	G
Template Known Secondary structure						T	T								S																							.	.	.	.	.	.	.	.	.	.	.										T	T																				T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.												.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		451	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	L	V	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions