Job Description P0AA89 Confidence 100.00% Date Thu Jan 5 11:12:12 GMT 2012 Rank 4 Aligned Residues 204 % Identity 32% Template c3i5aA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	M	R	N	T	R	N	L	N	N	R	S	L	R	V	K	F	L	L	Q	I	R	N	T	V	S	Q	I	I	T	L	L	R	E	L	F	E	E	V	S	R	H	E	V	G	M	D	V	L	T	K	L	L	N	R	R	F	L	P	T	I	F	K	R	E	I	A	H	A	N	R	T	G	T	P	L	S	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	L	V	A	R	I	R	Y	H	S	R	S	Y	M	T	L	L	Q	R	D	E	A	Y	R	A	L	R	V	S	Q	Q	Q	L	L	D	T	N	L	V	L	Q	R	L	M	N	S	D	G	L	T	G	L	S	N	R	R	H	F	D	E	Y	L	E	L	E	W	R	R	A	T	R	D	Q	A	Q	L	S	L	L
Template Known Secondary structure		T																																													S	B		T	T	T		S	B																				T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		I	I	D	V	D	K	F	K	E	I	N	D	T	W	G	H	N	T	G	D	E	I	L	R	K	V	S	Q	A	F	Y	D	N	V	.	R	S	S	D	Y	V	F	R	Y	G	G	D	E	F	I	I	V	L	T	E	A	S	E	N	E	T	L	R	T	A	E	R	I	R	S	R	V	E	K	T	K	L	K	A	A
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		M	I	D	V	D	Y	F	K	A	Y	N	D	N	F	G	H	L	E	G	D	E	A	L	R	Q	V	A	K	A	I	R	N	S	C	S	R	P	S	D	L	P	A	R	Y	G	G	E	E	F	A	M	V	L	P	N	T	S	P	G	G	A	R	L	L	A	E	K	L	R	Q	S	V	A	G	M	N	I	P	H	I
Template Known Secondary structure						T	T																														S	T	T								T	T							T	T																							B
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure				.																.	.
Query SS confidence				.																.	.
Query Sequence		N	G	.	E	D	I	A	L	S	L	S	I	G	A	A	M	F	N	.	.	G	H	P	D	Y	E	R	L	I	Q	I	A	D	E	A	L	Y	I	A	K	R	R	G	R	N	R	V	E
Query Conservation				.																.	.
Alig confidence				.																.	.
Template Conservation
Template Sequence		A	P	V	P	G	S	S	L	T	V	S	I	G	V	A	T	V	T	P	Q	V	G	Q	H	S	R	Q	L	I	L	D	A	D	K	G	L	Y	L	A	K	N	N	G	R	N	Q	V	A
Template Known Secondary structure			S	S	T	T		B														T	T			T																T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions