Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA89
Confidence100.00%DateThu Jan 5 11:12:12 GMT 2012
Rank3Aligned Residues208
% Identity34%Templatec3breA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:probable two-component response regulator; PDBTitle: crystal structure of p.aeruginosa pa3702
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260.........270.........280.........290.........300.........310.........320.........330
Predicted Secondary structure 












Query SS confidence 















































































Query Sequence  QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL
Query Conservation                                       
  
   
  
 



 

  
   
   
           

Alig confidence 















































































Template Conservation    
                                            
  
 
 
       
   
           
 
Template Sequence  IELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLL
Template Known Secondary structure  B
TTT
SB
T

Template Predicted Secondary structure 































































Template SS confidence 















































































   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   331........340.........350.........360.... .....370.........380.........390.........400.........
Predicted Secondary structure 







.
















Query SS confidence 

































.












































Query Sequence  IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV. RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA
Query Conservation   



 

 



 

  

 

  

  
    .
  
 


 




 


           
  
   
        
Alig confidence 

































.












































Template Conservation   



 
  


  
    
 

  

  
          
 
  



 


       
  


 
   
        
Template Sequence  MIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHD
Template Known Secondary structure  TT
TT

STT
TTT

TT

S
Template Predicted Secondary structure 



























Template SS confidence 















































































   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   410. ........420..... .... 430.........440.........450........
Predicted Secondary structure 

.
..



.







Query SS confidence 

.













. .



.




























Query Sequence  NG. EDIALSLSIGAAMF. . NGHP. DYERLIQIADEALYIAKRRGRNRVELWKA
Query Conservation    .    

 




  ..    .    

  

 


 

  


 
     
Alig confidence 

.













..



.




























Template Conservation         

 




             

  
  

  

  
 
       
Template Sequence  QPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQ
Template Known Secondary structure  SSSTT




SSS

TTTTSSS

Template Predicted Secondary structure 















Template SS confidence 




















































   287..290.........300.........310.........320.........330.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions