Return to main results Retrieve Phyre Job Id

Job DescriptionP32134
Confidence78.93%DateThu Jan 5 11:49:19 GMT 2012
Rank172Aligned Residues132
% Identity16%Templated1yhta1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-N-acetylhexosaminidase catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60...... ...70.........80......
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Query Sequence  PADLLDIASENNLRGVKIHVLDGERFSLGN. . . . . . . . . . . . . . . . . . . . . . . . . . . MDDKELSAFGDKARRLNLDI. . .
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Template Sequence  IKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIPE
Template Known Secondary structure  TT


BSSS
B
B
BTTTTB
GGGS
TTS

TTT

B
TT
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   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   87..90.........100.........110.........120.........130.........140.........150. ........160
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Query Sequence  . . HIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIE. . . . QHEDLKSHE
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Template Sequence  LDSPNHMTAIFKLVQKDRGVKYLQGLKSRQVDDEIDITNADSITFMQSLMSEVIDIFGDTSQHFHIGGDEFGYSVESNHE
Template Known Secondary structure  SSS

B
SS
TTSB
TT
GGG
S

S

TTS

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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   161.......
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Query Sequence  LVSLVKES
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Template Conservation         
Template Sequence  FITYANKL
Template Known Secondary structure 
Template Predicted Secondary structure 
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   195....200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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