Job Description P32134 Confidence 78.78% Date Thu Jan 5 11:49:19 GMT 2012 Rank 173 Aligned Residues 145 % Identity 10% Template d1vpqa_ SCOP info TIM beta/alpha-barrel TM1631-like TM1631-like Resolution 2.20

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																.																																										.	.	.	.
Query SS confidence																		.	.	.																.																																										.	.	.	.
Query Sequence		L	P	L	Y	L	H	A	Y	A	F	H	L	N	M	R	L	.	.	.	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	.	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	.	.	.	.
Query Conservation																		.	.	.																.																																										.	.	.	.
Alig confidence																		.	.	.																.								.	.	.	.	.																							.							.	.	.	.
Template Conservation																																												.	.	.	.	.																							.
Template Sequence		V	Y	V	G	T	S	G	F	S	F	E	D	W	K	G	V	V	Y	P	E	H	L	K	P	S	Q	F	L	K	Y	Y	W	A	V	L	G	F	R	I	V	E	L	.	.	.	.	.	N	F	T	Y	Y	T	Q	P	S	W	R	S	F	V	Q	M	L	R	K	T	P	P	.	D	F	Y	F	T	V	K	T	P	G
Template Known Secondary structure							B		S			S	T	T	B	T	T	T	B		T	T			G	G	G								T	S								.	.	.	.	.				S	S	S	S	S										T	T	S		T	.	T
Template Predicted Secondary structure																																												.	.	.	.	.																							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.
												89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																				.	.	.																																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																				.	.	.																																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	E	T	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	.	.	.	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	.	H	E
Query Conservation		.	.	.	.	.	.	.	.	.	.																				.	.	.																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.																				.	.	.																	.	.	.	.	.	.	.	.																						.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		S	V	T	H	V	L	W	K	E	G	K	D	P	K	E	D	M	E	N	F	T	R	Q	I	E	P	L	I	E	E	Q	R	L	K	M	T	L	A	Q	F	P	F	S	F	K	F	S	R	.	.	.	.	.	.	.	.	K	N	V	E	Y	L	E	K	L	R	E	S	Y	P	Y	E	L	A	V	E	F	R	H	Y
Template Known Secondary structure						T					T			S																	T	T											T	T						.	.	.	.	.	.	.	.															S								B	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	D	R	E	E	T	Y	E	F	L	R	N	H	G	I	T	F	V	V	V
Template Known Secondary structure		G	G		S											T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions