Return to main results Retrieve Phyre Job Id

Job DescriptionP32134
Confidence48.25%DateThu Jan 5 11:49:19 GMT 2012
Rank296Aligned Residues139
% Identity15%Templated1ur4a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.... .....70.........80.........90.....
Predicted Secondary structure 










......












.................
Query SS confidence 

























. . . . . .






























. . . . . . . . . . . . . . . . .
Query Sequence  DLLDIASENNLRGVKIHVLDGERFSL. . . . . . GNMDDKELSAFGDKARRLNLDIHIETSASDK. . . . . . . . . . . . . . . . .
Query Conservation 



 
 
 
 




         
......       
  

  
   

 
       
 .................
Alig confidence 

























......






























.................
Template Conservation 
   


  
 
 





  
       
  
   
      




  

 



 



 



  
  
 

    
Template Sequence  DIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLN
Template Known Secondary structure 
TT


S

B
TT

B
STT


TT

SSSS

SSS




GGGTT

Template Predicted Secondary structure 













































Template SS confidence 















































































   52.......60.........70.........80.........90.........100.........110.........120.........130.
 
   96...100.........110.........120.. .......130.........140.... .....150.........160
Predicted Secondary structure  .........








....
..







Query SS confidence  . . . . . . . . .


























. . . .





















. .















Query Sequence  . . . . . . . . . ASIDEAVAIALKTGASSVRFYPRYEGN. . . . LRDVLSIIANDIAYVRETYQDS. . GLTFTIEQHEDLKSHE
Query Conservation  .........
 
   

 
  


  


  
    ....         
 
  
   
   ..

 





      
Alig confidence  .........


























....





















..















Template Conservation     
      

  

      
     





 
 
          
 

 
   


   
   



 
       
Template Sequence  FEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGR
Template Known Secondary structure  TT

SSS
SS
BTTB


TTS

TTSTT
Template Predicted Secondary structure 

























Template SS confidence 















































































   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   161........170.........
Predicted Secondary structure 





Query SS confidence 


















Query Sequence  LVSLVKESEMESLSLLFDF
Query Conservation     


 
    

   
 
Alig confidence 













..


Template Conservation       
 
    

.. 

Template Sequence  YAWIAETLHRHHVD. . YDV
Template Known Secondary structure  TT

..
S
Template Predicted Secondary structure 



..
Template SS confidence 


















   212.......220..... ...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions