Job Description P32134 Confidence 48.54% Date Thu Jan 5 11:49:19 GMT 2012 Rank 294 Aligned Residues 129 % Identity 11% Template d1r46a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.25

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		18	.	20	.	.	.	.	.	.	.	.	.	30										.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																					.	.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																					.	.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	Y	L	H	A	Y	A	F	H	L	N	M	.	.	.	.	.	.	.	.	.	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	N	L	R	.	.	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	.	.	.	.	.	.	.	.	.	.	.	D	K	E	L	S	A	F
Query Conservation															.	.	.	.	.	.	.	.	.																					.	.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																					.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	G	W	L	H	W	E	R	F	M	C	N	L	D	C	Q	E	E	P	D	S	C	I	S	E	K	L	F	M	E	M	A	E	L	M	V	S	E	G	W	K	D	A	G	Y	E	Y	L	C	I	D	D	C	W	M	A	P	Q	R	D	S	E	G	R	L	Q	A	D	P	Q	R	F	P	H	G	I	R	Q	L
Template Known Secondary structure							S					T	T				T	T	T		T	T	T	S		S														T	T					T								S	S		B		S	S			T	T	S				B		T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		76	.	.	.	80	.	.	.	.	.	.	.	.										.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		G	D	K	A	R	R	L	N	L	D	I	H	I	.	.	.	.	.	.	.	.	.	E	T	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		A	N	Y	V	H	S	K	G	L	K	L	G	I	Y	A	D	V	G	N	K	T	C	A	G	F	P	G	S	F	G	Y	Y	D	I	D	A	Q	T	F	A	D	W	G	V	D	L	L	K	F	.	.	.	.	D	G	C	Y	C	D	S	L	E	N	L	A	D	G	Y	K	H	M	S	L	A	L	N	R	T	G	R
Template Known Secondary structure								T	T									S	S	S	B		T	T	S	S	B			T	T	T												T							.	.	.	.				S		S	S																				S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		147	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions