Return to main results Retrieve Phyre Job Id

Job DescriptionP32134
Confidence25.25%DateThu Jan 5 11:49:19 GMT 2012
Rank463Aligned Residues77
% Identity16%Templated1ea9c3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution3.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120......... 130.........140.........150. ........
Predicted Secondary structure 









...........


...





Query SS confidence 



































. . . . . . . . . . .





















. . .







Query Sequence  DKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSI. . . . . . . . . . . IANDIAYVRETYQDSGLTFTIE. . . QHEDLKSH
Query Conservation 
 
 
   

 
  


  


  
           ...........  
 
  
   
   

 



...

      
Alig confidence 



































...........





















...







Template Conservation 
  

   




 


  
 
 

       

   
   

   

  

  

   
  

 



 
 

      
Template Sequence  DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFP
Template Known Secondary structure 
TT
S


SS
SSSSTTS
S
TT


TTT

TTTT



SB

TTT
Template Predicted Secondary structure 











































Template SS confidence 















































































   170.........180.........190.........200.........210.........220.........230.........240.........
 
   160.........170
Predicted Secondary structure 


Query SS confidence 










Query Sequence  ELVSLVKESEM
Query Conservation 
   


 
  
Alig confidence 










Template Conservation             
Template Sequence  PFVDVLKNGEK
Template Known Secondary structure  TTTTT
Template Predicted Secondary structure 




Template SS confidence 










   250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions