Job Description P32134 Confidence 99.37% Date Thu Jan 5 11:49:19 GMT 2012 Rank 38 Aligned Residues 187 % Identity 13% Template d1a0ca_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		P	L	Y	L	H	A	Y	A	F	H	L	N	M	R	L	E	R	V	L	P	A	D	L	.	.	.	.	.	L	D	I	A	S	E	N	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	.	.	.	.	.	.	.	.	A	F	G	D	K	A	R	R	L	N	L
Query Conservation																									.	.	.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																			.	.	.													.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.
Template Sequence		Q	F	G	K	A	T	M	Q	R	P	W	N	H	Y	T	D	P	M	D	I	A	K	A	R	V	E	A	A	F	E	F	F	D	K	I	N	A	P	Y	F	C	F	H	D	R	D	.	.	.	I	A	P	E	G	D	T	L	R	E	T	N	K	N	L	D	T	I	V	A	M	I	K	D	Y	L	K	T	S	K	T
Template Known Secondary structure		T	T	B							G	G	G	G			S																				T		S									.	.	.		S				S	S																				T	T		S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		85	.	.	.	.	90																						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		D	I	H	I	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	.	.	.	.	.	.	.	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	L	W	G	T	A	N	L	F	S	N	P	R	F	V	H	G	A	S	T	S	C	N	A	D	V	F	A	Y	S	A	A	Q	V	K	K	A	L	E	I	T	K	E	L	G	G	E	N	Y	V	F	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	M	E	F	E	L	D	N	F	A	R	F	L	H	M
Template Known Secondary structure											S	S	S	G	G	G	T	T		S	T	T		S																						T	T		S							T	T	S			S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		137	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.									.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure											.	.												.	.	.	.	.	.	.	.																	.																					.	.
Query SS confidence											.	.												.	.	.	.	.	.	.	.																	.																					.	.
Query Sequence		V	R	E	T	Y	Q	D	S	G	.	.	L	T	F	T	I	E	Q	H	E	D	L	.	.	.	.	.	.	.	.	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	.	L	S	L	L	F	D	F	A	N	M	I	N	A	N	E	H	P	I	D	A	.	.	L	K	T	M	A	P	H	I	T	Q	V
Query Conservation											.	.												.	.	.	.	.	.	.	.																	.																					.	.
Alig confidence											.	.												.	.	.	.	.	.	.	.																	.																					.	.
Template Conservation
Template Sequence		A	V	D	Y	A	K	E	I	G	F	E	G	Q	F	L	I	E	P	K	P	K	E	P	T	K	H	Q	Y	D	F	D	V	A	N	V	L	A	F	L	R	K	Y	D	L	D	K	Y	F	K	V	N	I	E	A	N	H	A	T	L	A	F	H	D	F	Q	H	E	L	R	Y	A	R	I	N	G	V	L	G	S	I
Template Known Secondary structure									T	T			S								S		S	S	S	S			S	S		S											T	T		T	T	T													T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		204	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	N	T
Template Known Secondary structure					B
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions