Job Description P32134 Confidence 100.00% Date Thu Jan 5 11:49:19 GMT 2012 Rank 15 Aligned Residues 234 % Identity 13% Template c3qxbB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution Resolution 1.90 Å

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		16	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure										.																																																																				.	.	.	.
Query SS confidence										.																																																																				.	.	.	.
Query Sequence		T	L	P	L	Y	L	H	A	.	Y	A	F	H	L	N	M	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	E	T	.	.	.	.
Query Conservation										.																																																																				.	.	.	.
Alig confidence										.													.	.	.	.																																																				.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		G	X	K	L	G	V	N	L	C	F	A	V	K	R	W	L	E	P	D	R	L	.	.	.	.	A	G	L	V	R	D	D	L	G	L	E	Y	V	Q	Y	T	Y	D	L	T	D	P	W	W	P	D	I	E	R	D	R	R	A	I	A	Y	A	K	A	F	R	K	A	G	L	T	I	E	S	T	F	G	G	L	A
Template Known Secondary structure									G	G	G	G	T	T	T	S		S					.	.	.	.							T	T									T	T	T	S		T	T	S																			T	T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
																91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	.	.	.	.	.	.	.	.	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Y	T	Y	N	H	F	L	A	P	T	L	E	L	Q	S	L	G	Y	Q	H	L	K	R	A	I	D	X	T	A	A	X	E	V	P	A	T	G	X	P	F	G	S	Y	S	A	A	D	A	L	N	P	A	R	R	E	E	I	Y	A	I	A	R	D	X	W	I	E	L	A	A	Y	A	K	R	Q	G	L	S	X
Template Known Secondary structure				T	S		B	T	T		S	S																					T	T		S							B	B							T																											T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		149	150	.	.							.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.					.	.	.																															.	.	.	.	.
Query SS confidence						.	.	.	.	.	.					.	.	.																															.	.	.	.	.
Query Sequence		T	I	E	Q	.	.	.	.	.	.	H	E	D	L	.	.	.	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L	L	F	D	F	A	N	M	I	N	A	N	.	.	.	.	.	E	H	P	I	D	A	L	K	T	M	A	P	H	I	T	Q	V	H	I	K	D	A	L	I	V	K	E	P
Query Conservation						.	.	.	.	.	.					.	.	.																															.	.	.	.	.
Alig confidence						.	.	.	.	.	.					.	.	.																															.	.	.	.	.																							.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		L	Y	V	E	P	V	P	L	A	T	E	F	P	S	S	A	A	D	A	A	R	L	X	A	D	L	D	G	R	T	E	I	P	V	R	L	L	V	D	W	G	H	A	L	F	E	P	L	F	G	P	E	A	D	X	D	H	W	X	D	L	C	Q	P	W	I	A	A	Y	H	I	Q	Q	T	.	.	.	.	.	D
Template Known Secondary structure								S		T	T	B	S	S		S												T	T	T	S	S	S												T						G	G	G		S									G	G	G								B		.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	G	H	K	A	C	I	S	G	Q	G	D	M	P	F	K	A	L	L	T	H	L	I	C	L	G	D	D	E	P	Q	V	T	A	Y	G	L	E	E	E	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	L	D	R	H	W	S	F	T	Q	P	G	V	V	T	P	Q	R	L	Q	D	F	W	D	K	Y	A	L	T	D	Q	T	F	F	A	E	I	L	Y	P	F	E	A
Template Known Secondary structure		S	S	S				B		T	T	S		S	S													T	T		S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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