 |
Job Description | P32134 | Confidence | 63.85% | Date | Thu Jan 5 11:49:19 GMT 2012 |
Rank | 223 | Aligned Residues | 72 |
% Identity | 15% | Template | c3pg8B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; |
PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima
|
Resolution | 2.00 Å |
|
 |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | H | I | E | T | S | A | S | D | K | A | S | I | D | E | A | V | A | I | A | L | K | T | G | A | S | S | V | R | F | Y | P | R | Y | E | G | N | L | R | D | V | L | S | I | I | A | N | D | I | A | Y | V | R | E | T | Y | Q | D | S | G | L | T | F | T | I | E | Q | H | E | D | L | K | S | H | E | L | V | S | L | V |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |
|
Template Sequence |   |
I | I | A | G | P | S | V | E | G | R | E | M | L | M | E | T | A | H | F | L | S | E | L | G | V | K | V | L | R | G | G | A | Y | K | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | K | G | L | E | Y | L | R | E | A | A | D | K | Y | G | M | Y | V | V | T | E | A | L | G | E | D | D | L | P | K | V | A | E | Y | A |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| . |
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S | G | G | G |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
  |   |
166 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
K |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
D |
Template Known Secondary structure |   |
S |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
179 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|