Job Description P32134 Confidence 97.06% Date Thu Jan 5 11:49:19 GMT 2012 Rank 54 Aligned Residues 205 % Identity 10% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																								.	.	.	.	.									.	.	.	.
Query SS confidence																		.	.	.	.	.	.																								.	.	.	.	.									.	.	.	.
Query Sequence		K	I	L	Q	R	V	D	T	L	P	L	Y	L	H	A	Y	.	.	.	.	.	.	A	F	H	L	N	M	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	.	.	.	.	.	N	L	R	G	V	K	I	H	.	.	.	.	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S
Query Conservation																		.	.	.	.	.	.																								.	.	.	.	.									.	.	.	.
Alig confidence																		.	.	.	.	.	.																								.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		E	A	L	E	R	L	K	Q	V	P	I	S	I	H	C	W	Q	G	D	D	V	G	G	F	E	L	D	Y	P	G	K	A	T	T	P	E	E	L	R	M	D	L	E	K	A	L	S	L	I	P	G	K	H	R	V	N	L	H	A	I	Y	A	E	T	D	G	K	V	V	E	R	D	Q	L	E	P	R	H	F	E
Template Known Secondary structure								T	T							G	G	G	T	T	T	T								S					S													T	T	S		S								G	G	G				S	S					G	G	G			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.																						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.	.	.	.
Query Sequence		A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	S	A	S	D	K	A	S	I	D	E	A	V	A	I	.	.	.	.	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	N	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		K	W	V	R	W	A	K	R	H	G	L	G	L	D	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R	Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C	L	T	N	I	W	I	P	D	G	Y	K	D	T	P	S	D
Template Known Secondary structure											T										S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S													S	S			S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																		.																		.	.	.	.	.	.
Query SS confidence																		.																		.	.	.	.	.	.
Query Sequence		L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	.	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	H	E	D	.	.	.	.	.	.	L	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L	L	F	D	F	A	N	M	I	N	A	N	E	H	P	I	D	A	L	K	T
Query Conservation																		.																		.	.	.	.	.	.
Alig confidence																		.																		.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	N	L	D	A	V	E	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	S	Y	A	L	K	N	D	K	L	C	L	L	D	T	G	H	Y	H	P	T	E	T	V	S	N	K	I	S	A	M
Template Known Secondary structure		S															T		S				T	T	T									S		B	T	T	B		S			S	S												T	T							T	T	S	S		T	T			S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		196	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	A	.	.	P	H	I	T	Q	V	H	I	K	D	A	L	I	V	K	E	P
Query Conservation				.	.
Alig confidence				.	.				.
Template Conservation									.
Template Sequence		L	L	F	H	D	K	L	.	A	L	H	V	S	R	P	V	R	W	D	S	D
Template Known Secondary structure						S			.						B		S	S	S
Template Predicted Secondary structure									.
Template SS confidence
		276	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions