Job Description P32134 Confidence 99.97% Date Thu Jan 5 11:49:19 GMT 2012 Rank 24 Aligned Residues 220 % Identity 15% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		18	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																						.																																										.
Query SS confidence											.	.	.	.	.	.	.																						.																																										.
Query Sequence		P	L	Y	L	H	A	Y	A	F	.	.	.	.	.	.	.	H	L	N	M	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	.	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	.
Query Conservation											.	.	.	.	.	.	.																						.																																										.
Alig confidence											.	.	.	.	.	.	.																						.												.	.	.	.	.	.	.	.																							.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		E	F	G	A	G	L	W	H	F	A	N	Y	I	D	R	Y	A	V	D	G	Y	G	P	A	L	S	T	I	D	Q	I	N	A	A	K	E	V	G	E	L	S	Y	V	D	L	P	Y	P	F	.	.	.	.	.	.	.	.	T	P	G	V	T	L	S	E	V	K	D	A	L	K	D	A	G	L	K	A	I	G	I
Template Known Secondary structure							G	G	G	G	S					S	S		T	T		S	S																S	S									S		.	.	.	.	.	.	.	.	S	T	T														T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
																					89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	.	.	.	.	.	.	.	E	G	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	E	I	Y	L	Q	K	W	S	R	G	A	F	T	N	P	D	P	A	A	R	A	A	A	F	E	L	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N	P
Template Known Secondary structure					T	T	S	G	G	G	T	T		S	T	T		S	S																						T		S							T	T				S	S	T	T	S	S																			T		T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																																											.	.
Query SS confidence																.	.	.	.	.	.																																											.	.
Query Sequence		D	S	G	L	T	F	T	I	E	Q	H	E	D	L	.	.	.	.	.	.	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L	L	F	D	F	A	N	M	I	N	A	N	E	H	P	I	D	A	L	K	T	M	A	P	.	.	H	I	T	Q	V	H	I	K	D	A	L	I	V	K	E	P
Query Conservation																.	.	.	.	.	.																																											.	.
Alig confidence																.	.	.	.	.	.																																											.	.											.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		D	V	K	F	A	I	E	Y	K	P	R	E	P	R	V	K	X	T	W	D	S	A	A	R	T	L	L	G	I	E	D	I	G	L	D	N	V	G	V	L	L	D	F	G	H	A	L	Y	G	G	E	S	P	A	D	S	A	Q	L	I	I	D	R	G	R	L	F	G	X	D	V	N	D	N	.	.	.	.	.	.
Template Known Secondary structure		T	S								S		S	S	S	S			S	S		S												T		T	T													T	T													T	T							B		B		.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		G	G	L	G	H	K	A	C	I	S	G	Q	G	D	.	M	P	F	K	A	L	L	T	H	L	I	C	L	G	D	D	E	P	Q	V	T	A	Y
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		L	R	G	W	D	D	D	L	V	V	G	T	V	H	X	T	E	I	F	E	F	F	Y	V	L	K	I	N	N	W	Q	G	V	W	Q	L	D	Q
Template Known Secondary structure			S	S	S				B		T	T	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions