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Job DescriptionP32134
Confidence35.78%DateThu Jan 5 11:49:19 GMT 2012
Rank369Aligned Residues111
% Identity11%Templatec3gh7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-hexosaminidase; PDBTitle: crystal structure of beta-hexosaminidase from paenibacillus2 sp. ts12 in complex with galnac
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.... .....70.........80........
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Query Sequence  DLLDIASENNLRGVKIHVLDGERFSL. . . . . . . . . . . . . . . . . . . . . . GNMDDKELSAFGDKARRLNLDIHI. . . . . . . .
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Template Sequence  RQIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAERYIEVIPEIDMPGHT
Template Known Secondary structure  TTT


B
SS
B
B

TTSTTTTS

GGG




B
TTT



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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   8990.........100.........110.........120.........130.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYV
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Template Sequence  NAALASYGELNPDGKRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAI. SPSPYIHLGGDESNATSAADYDYFFGRV
Template Known Secondary structure 
GGGSTTS






S


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   260.........270.........280.........290.........300.........310 .........320.........330........
 
   138.140.........150
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Query Sequence  RETYQDSGLTFTI
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Template Sequence  TAIANSYGKKVVG
Template Known Secondary structure  TT
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   339340.........350.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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