Return to main results Retrieve Phyre Job Id

Job DescriptionP32134
Confidence38.24%DateThu Jan 5 11:49:19 GMT 2012
Rank356Aligned Residues139
% Identity14%Templatec3dfyJ_
PDB info PDB header:isomeraseChain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGAS
Query Conservation       
 



 
 
 
 




         
       
  

  
   

 
       
 
 
   

 
  


 
Alig confidence 




























......




































...




Template Conservation 
       
      
         



......           
     



 

             ...    
Template Sequence  NMGYTQKEAVEFARAVYQKGIDIAVYEQP. . . . . . VRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVK. . . EEAVD
Template Known Secondary structure  TT
S
TT


S

......S
TT

SS
STT
SS...TT

S
Template Predicted Secondary structure 












......















...




Template SS confidence 















































































   190.........200.........210........ .220.........230.........240.........250..... ....260
 
   112.......120.........130.........140.........150.........160.........170.........180.........
Predicted Secondary structure 
























Query SS confidence 













































































Query Sequence  SVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFANMINANEHP
Query Conservation   


  
             
 
  
   
   

 





      
   


 
    

   
 

    



Alig confidence 





........

.















































.











Template Conservation   
  
 ........  .


         
   
         

 
   
  



        . 
        
 
Template Sequence  YVNIKL. . . . . . . . MK. SGISDALAIVEIAESSGLKLMIGCMGESSLGINQSVHFALGTGAFEFH. DLDSHLMLKEEV
Template Known Secondary structure 
.........TTT


SS




S.


B

SS
Template Predicted Secondary structure 

........

.
















.




Template SS confidence 













































































   261..... .. .270.........280.........290.........300.........310...... ...320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions