 |
Job Description | P32134 | Confidence | 42.02% | Date | Thu Jan 5 11:49:19 GMT 2012 |
Rank | 333 | Aligned Residues | 90 |
% Identity | 12% | Template | c3cx3A_ |
PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:lipoprotein; |
PDBTitle: crystal structure analysis of the streptococcus pneumoniae2 adcaii protein
|
Resolution | 2.40 Å |
|
 |
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
. | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
I | A | S | E | N | N | L | R | G | V | K | I | H | V | L | D | G | E | R | F | S | L | G | N | M | D | D | K | E | L | S | A | F | G | D | K | A | R | R | L | N | L | D | I | H | I | E | T | S | A | S | D | K | A | S | I | D | E | A | V | A | I | A | L | K | T | G | A | S | S | V | R | F | . |
. |
Y | P | R | Y | E |
Query Conservation |   |
  |
|   |
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |
|
|
|   |   |
|
|
| . | . |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
| . | . | . |
|   |   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |
Template Sequence |   |
L | A | K | R | F | G | L | N | Q | L | G | I | A | G | I | S | P | E | Q | . |
. |
. |
. |
E | P | S | P | R | Q | L | T | E | I | Q | E | F | V | K | T | Y | K | V | K | T | I | F | T | E | S | N | A | S | S | K | V | A | E | T | L | . |
. |
. |
V | K | S | T | G | V | G | L | K | T | L | N | P | L | E | S | D | P |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
|  |  |  |  |  |
| S | S | T | T |
| . | . | . | . |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |
| S | S | S |
|
|  |  |  |  |  |  | . | . | . |  | S | S | S | S |
|
|  |  |  |
|
|
| S | S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | |
|
|
|
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | |
|
|
. | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . |
  |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | L | R | D | V | L | S | I | I | A | N | D | I | A | Y | V | R | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
Q | N | D | K | T | Y | L | E | N | L | E | E | N | X | S | I | L | A | E |
Template Known Secondary structure |   |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|