Job Description P32134 Confidence 99.96% Date Thu Jan 5 11:49:19 GMT 2012 Rank 25 Aligned Residues 216 % Identity 15% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.															.
Predicted Secondary structure																									.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	H	L	N	M	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	.	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Query Conservation																									.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.								.																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.																								.	.
Template Sequence		S	F	R	W	Y	G	K	K	D	P	V	T	.	.	.	.	L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	Y	D	V	P	V	G	.	.	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	K	P
Template Known Secondary structure								T	T		S	S		.	.	.	.						T	S	T	T										S	S		T	T	.	.	S																	T	T																		T		T
Template Predicted Secondary structure														.	.	.	.																								.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.																																								.	.	.	.	.	.	.
Predicted Secondary structure																												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	.	.	Y	P	R	Y	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	D	V	L	S
Query Conservation																												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	R	D	A	L	I	E	N	Y	K	T	S	I	R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A
Template Known Secondary structure		T																			T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.												.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	H	.	.	.	.	.	.	.	.	.	.	.	E	D	L	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L	L	F	D	F	A	N	M	I	N	A	N	E	.	H	P	I	D	A	L	K	T	M
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		N	L	E	Y	F	I	K	A	I	L	P	T	A	E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	N	D	V	L	A	M	T	E	Y	A
Template Known Secondary structure																		T									S	S	S	S			T	T							S									T	T	S		S	T	T											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		197			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		A	.	.	P	H	I	T	Q	V	H	I	K	D	A	L	I	V	K	E	P	G	G	L	G	H	K	A	C	I	S	G	Q	G	D	M	P	F	K	A	L	L	T	H	L	I	C	L	G	D	D	E	P	Q	V
Query Conservation			.	.
Alig confidence			.	.											.	.
Template Conservation															.	.
Template Sequence		L	K	R	N	R	I	N	F	M	H	T	R	N	.	.	V	T	A	G	A	W	G	F	Q	E	T	A	H	L	S	Q	A	G	D	I	D	M	N	A	V	V	K	L	L	V	D	Y	D	W	Q	G	S	L	R
Template Known Secondary structure					T										.	.					T	T							S	S	G	G	G	S	S													T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions