Job Description P32134 Confidence 99.93% Date Thu Jan 5 11:49:19 GMT 2012 Rank 34 Aligned Residues 217 % Identity 16% Template c3aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 Resolution 1.58 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90														.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	D	L	L	D	I	A	S	E	N	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	S	D	K	A	S	I	D	E	A	V	A
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	G	A	V	E	E	A	T	A	L	G	L	T	A	F	Q	I	F	A	K	S	P	R	S	W	R	P	R	A	L	S	P	A	E	V	E	A	F	R	A	L	R	E	A	S	G	G	L	P	A	V	I	H	A	S	Y	L	V	N	L	G	A	E	G	E	L	W	E	K	S	V	A	S	L	A	D	D	L	E
Template Known Secondary structure													T		S						S	S		T	T			S																			T	T										T	T			T	T		S	S	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	H	E	D	L	.	.	.	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L	L	F	D	F	A
Query Conservation																																																							.	.	.
Alig confidence																				.	.	.	.																																.	.	.
Template Conservation																				.	.	.	.
Template Sequence		K	A	A	L	L	G	V	E	Y	V	V	V	H	P	G	S	G	R	.	.	.	.	P	E	R	V	K	E	G	A	L	K	A	L	R	L	A	G	V	R	S	R	P	V	L	L	V	E	N	T	A	G	G	G	E	K	V	G	A	R	F	E	E	L	A	W	L	V	A	D	T	P	L	Q	V	C	L	D	T	C
Template Known Secondary structure							T										B	S		.	.	.	.																T			S	S	S											T	T	B	S			S									T	T	S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		181	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250
Predicted Secondary structure								.	.	.	.												.	.	.	.	.																																																	.
Query SS confidence								.	.	.	.												.	.	.	.	.																																																	.
Query Sequence		N	M	I	N	A	N	.	.	.	.	E	H	P	I	D	A	L	K	T	M	A	.	.	.	.	.	P	H	I	T	Q	V	H	I	K	D	A	L	I	V	K	E	P	G	G	L	G	H	K	A	C	I	S	G	Q	G	D	M	P	F	K	A	L	L	T	H	L	I	C	L	G	D	D	E	.	P	Q	V	T	A
Query Conservation								.	.	.	.												.	.	.	.	.																																																	.
Alig confidence								.	.	.	.												.	.	.	.	.													.	.																				.															.
Template Conservation																																								.	.																				.
Template Sequence		H	A	Y	A	A	G	Y	D	V	A	E	D	P	L	G	V	L	D	A	L	D	R	A	V	G	L	E	R	V	P	V	V	H	L	N	D	S	V	.	.	G	G	L	G	S	R	V	D	H	H	A	H	L	L	Q	G	K	I	G	.	E	G	L	K	R	V	F	L	D	P	R	L	K	D	R	V	F	I	L	E
Template Known Secondary structure							T			T	T	T													T		G	G	G										S	.	.	S		T	T									T	T	S	S	S	S	T	.	T							T		G	G	G	T	T	S
Template Predicted Secondary structure																																								.	.																				.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	L	E	E	E	V	D	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	R	G	P	E	E	D	A	W
Template Known Secondary structure		S			S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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