Job Description P32134 Confidence 100.00% Date Thu Jan 5 11:49:19 GMT 2012 Rank 11 Aligned Residues 232 % Identity 14% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																			.																										.	.	.	.	.
Query SS confidence																																																			.																										.	.	.	.	.
Query Sequence		P	L	Y	L	H	A	Y	A	F	H	L	N	M	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	.	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	E	T	S	.	.	.	.	.
Query Conservation																																																			.																										.	.	.	.	.
Alig confidence												.	.	.	.	.	.																																		.																										.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		N	F	T	L	F	T	G	Q	W	A	.	.	.	.	.	.	D	L	P	L	E	E	V	C	R	L	A	R	D	F	G	Y	D	G	L	E	L	A	C	W	G	D	H	F	E	V	D	K	A	L	A	D	P	S	Y	V	D	S	R	H	Q	L	L	D	K	Y	G	L	K	C	W	A	I	S	N	H	L	V	G	Q
Template Known Secondary structure								G	G	G	T	.	.	.	.	.	.	T	S													T		S						S	S	T	T	T										T	T												T	T		B		S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.							.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
																															92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.														.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	V	L	S	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	C	D	A	I	I	D	E	R	H	E	A	I	L	P	A	R	I	W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T	G	S	A	I	W	H	L	V	A	X	F	P	P	A	P	E	S	X	I	E	R	G	Y	Q	D
Template Known Secondary structure						S	S		S							S						T	T																									T											S	S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																													.	.	.														.
Query SS confidence																													.	.	.														.
Query Sequence		I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	H	E	D	L	.	.	.	K	S	H	E	L	V	S	L	V	K	E	S	E	.	M	E	S	L	S	L	L	F	D	F	A	N	M	I	N	A	N	E	H	P	I	D	A	L	K	T	M	A	P	H	I	T	Q	V	H	I
Query Conservation																													.	.	.														.
Alig confidence																													.	.	.														.
Template Conservation
Template Sequence		F	A	D	R	W	N	P	I	L	D	V	F	D	A	E	G	V	R	F	A	H	E	V	H	P	S	E	I	A	Y	D	Y	W	T	T	H	R	A	L	E	A	V	G	H	R	P	A	F	G	L	N	F	D	P	S	H	F	V	W	Q	D	L	D	P	V	G	F	L	W	D	F	R	D	R	I	Y	H	V	D	C
Template Known Secondary structure																	T									T	T	S	S			S											T	T	T		T	T							T							T										T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.														220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	A	L	I	V	K	E	P	G	G	L	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	C	I	S	G	Q	G	D	M	P	F	K	A	L	L	T	H	L	I	C	L	G	D	D	E	P	Q	V	T	A	Y	G	L	E	E
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	A	R	K	R	L	D	G	R	N	G	R	L	G	S	H	L	P	W	G	D	P	R	R	G	W	D	F	V	S	A	G	H	G	D	V	P	W	E	D	V	F	R	X	L	R	S	I	D	Y	Q	G	P	V	S	V	E	W	E	D	A	G
Template Known Secondary structure										S	S	S	B	T	T		T	T			T	T		T	T	B	S						T	T	S	S														T	T			S									T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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