Return to main results Retrieve Phyre Job Id

Job DescriptionP32134
Confidence96.82%DateThu Jan 5 11:49:19 GMT 2012
Rank62Aligned Residues134
% Identity13%Templatec2yxgD_
PDB info PDB header:lyaseChain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.. .......90.........100.........110...
Predicted Secondary structure 















...










Query SS confidence 













































. . .






























Query Sequence  PADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRL. . . NLDIHIETSASDKASIDEAVAIALKTGASSV
Query Conservation 
 



 
 
 
 




         
       
  

  
   ...

 
       
 
 
   

 
  


  
Alig confidence 

























...
















...






























Template Conservation         
   

 

   
 


  ... 

  

  
             

 

      
 
  
  
   
 
 
Template Sequence  LEENINFLIENGVSGIVAVGTTGESP. . . TLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAV
Template Known Secondary structure  TT
SSSTTTTGG...GS
TTSS


SST
S
Template Predicted Secondary structure 









...














Template SS confidence 















































































   23......30.........40........ .50.........60.........70.........80.........90.........
 
   114.....120.........130.........140.........150.... .....160.........170.........180
Predicted Secondary structure 











.....








Query SS confidence 








































. . . . .

























Query Sequence  RFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHE. . . . . DLKSHELVSLVKESEMESLSLLFDFA
Query Conservation 

  
             
 
  
   
   

 





 .....     
   


 
    

   
 
Alig confidence 












.....






















.....













..









Template Conservation   
 

     
  ..... 
      

     

 


 
   
       
  
    ..
 
 


 
 
Template Sequence  LSITPYYNKPTQE. . . . . GLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEY. . SNISAVKEAN
Template Known Secondary structure 


SS


.....
SS

S




..TT

Template Predicted Secondary structure 








.....














..




Template SS confidence 







































































   100.........110.. .......120.........130.........140.........150.... .....160....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions