Job Description P32134 Confidence 99.95% Date Thu Jan 5 11:49:19 GMT 2012 Rank 29 Aligned Residues 227 % Identity 12% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure										.	.	.																																																																				.	.
Query SS confidence										.	.	.																																																																				.	.
Query Sequence		L	P	L	Y	L	H	A	Y	.	.	.	A	F	H	L	N	M	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	L	D	I	H	I	E	T	S	.	.
Query Conservation										.	.	.																																																																				.	.
Alig confidence										.	.	.				.	.	.	.	.	.	.	.	.	.	.																																																						.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	I	G	A	H	M	P	I	S	K	G	F	D	.	.	.	.	.	.	.	.	.	.	.	R	V	P	Q	D	T	V	N	I	G	G	N	S	F	Q	I	F	P	H	N	A	R	S	W	S	A	K	L	P	S	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	S
Template Known Secondary structure											T	T		G	G	.	.	.	.	.	.	.	.	.	.	.	G								T	T		S						S				S	S	S																					T			G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.												.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
																92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	.	.	E	G	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	H	E	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		G	Y	L	I	N	L	A	S	P	K	D	D	I	W	Q	K	S	V	E	L	L	K	K	E	V	E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	S	H	L	G	T	G	E	E	E	G	I	D	R	I	V	R	G	L	N	E	V	L	N	N	T	E	G	V	V	I	L	L	E	N	V	S	Q	K	G
Template Known Secondary structure			T	T			T	T		S	S																						T												T	T	S																		T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		156					.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.														.																						.	.	.	.	.	.								.	.	.	.	.
Query SS confidence			.	.	.	.														.																						.	.	.	.	.	.								.	.	.	.	.
Query Sequence		L	.	.	.	.	K	S	H	E	L	V	S	L	V	K	E	S	E	.	M	E	S	L	S	L	L	F	D	F	A	N	M	I	N	A	N	E	H	P	I	.	.	.	.	.	.	D	A	L	K	T	M	A	.	.	.	.	.	P	H	I	T	Q	V	H	I	K	D	A	L	I	V	K	E	P	G	G	L	G	H
Query Conservation			.	.	.	.														.																						.	.	.	.	.	.								.	.	.	.	.
Alig confidence			.	.	.	.														.																						.	.	.	.	.	.								.	.	.	.	.													.	.
Template Conservation																																																																								.	.
Template Sequence		G	N	I	G	Y	K	L	E	Q	L	K	K	I	R	D	L	V	D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G	Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	E	R	L	K	M	I	H	L	N	D	S	K	.	.	Y	P	L	G	A	A	K	D
Template Known Secondary structure		T				S	S												S		G	G	G													T	T			T	T	S															T		G	G	G										S	.	.	S		T	T
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		K	A	C	I	S	G	Q	G	D	M	P	F	K	A	L	L	T	H	L	I	C	L	G	D	D	E	.	P	Q	V	T	A	Y	G	L	E	E	E
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		R	H	E	R	I	G	S	G	F	I	G	E	E	G	F	A	V	F	F	S	F	K	E	I	Q	E	V	P	W	I	L	E	T	P	G	G	N	E
Template Known Secondary structure						T	T	S	S	S	S										T						T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions