Job Description P32134 Confidence 96.63% Date Thu Jan 5 11:49:19 GMT 2012 Rank 67 Aligned Residues 144 % Identity 13% Template c2r8wB_ PDB info PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		F	H	L	N	M	R	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R	R	L	N	.	.	.	L	D	I	H	I	E	T	S	A	S	D	K	A	S	I	D	E	A	V
Query Conservation																																																												.	.	.
Alig confidence																																							.	.	.																			.	.	.
Template Conservation																																							.	.	.
Template Sequence		A	D	E	A	G	R	V	D	I	E	A	F	S	A	L	I	A	R	L	D	A	A	E	V	D	S	V	G	I	L	G	S	T	G	I	Y	X	.	.	.	Y	L	T	R	E	E	R	R	R	A	I	E	A	A	A	T	I	L	R	G	R	R	T	L	X	A	G	I	G	A	L	R	T	D	E	A	V	A	L	A
Template Known Secondary structure		B		T	T			B															T	T		S					S	S	T	T	T	T	G	G	.	.	.	G	S																	T	T	S	S									S	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	N	L	R	D	V	L	S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	H	E	.	.	.	.	.	D	L	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L	L	F
Query Conservation																																																						.	.	.	.	.
Alig confidence																										.	.	.	.	.																								.	.	.	.	.													.	.	.
Template Conservation																										.	.	.	.	.																																									.	.	.
Template Sequence		K	D	A	E	A	A	G	A	D	A	L	L	L	A	P	V	S	Y	T	P	L	T	Q	E	.	.	.	.	.	E	A	Y	H	H	F	A	A	V	A	G	A	T	A	L	P	L	A	I	Y	N	N	P	T	T	T	R	F	T	F	S	D	E	L	L	V	R	L	A	Y	.	.	.	I	P	N	I	R	A	I	K
Template Known Secondary structure								T		S									S	S						.	.	.	.	.														S	S								G	G	G	T														T	.	.	.	S	T	T
Template Predicted Secondary structure																										.	.	.	.	.																																									.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.
		178	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	P	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		195	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions