Job Description P32134 Confidence 99.46% Date Thu Jan 5 11:49:19 GMT 2012 Rank 36 Aligned Residues 223 % Identity 12% Template c2i56A_ PDB info PDB header:isomerase, metal-binding protein Chain: A: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase from pseudomonas2 stutzeri with l-rhamnose Resolution 1.97 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.	.	.	.	.	.	.										.
Query SS confidence																			.	.	.	.	.	.	.										.
Query Sequence		K	I	L	Q	R	V	D	T	L	P	L	Y	L	H	A	Y	A	.	.	.	.	.	.	.	F	H	L	N	M	R	L	E	R	.	V	L	P	A	D	L	L	D	I	A	S	E	N	N	L	R	G	V	K	I	H	V	L	D	G	E	R	F	S	L	G	N	M	D	D	K	E	L	S	A	F	G	D	K	A	R
Query Conservation																			.	.	.	.	.	.	.										.
Alig confidence																			.	.	.	.	.	.	.										.														.																						.	.	.
Template Conservation																																																	.																						.	.	.
Template Sequence		A	V	T	A	K	V	E	K	F	F	V	A	V	P	S	W	G	V	G	T	G	G	T	R	F	A	R	F	P	G	T	G	E	P	R	G	I	F	D	K	L	D	D	C	A	V	I	.	Q	Q	L	T	R	A	T	P	N	V	S	L	H	I	P	W	D	K	A	D	P	.	.	.	K	E	L	K	A	R	G	D
Template Known Secondary structure								T	T				B			G	G	G	S	S			B		S	S		B				S	S				S												.					S								B	T	T	T	T		S			.	.	.
Template Predicted Secondary structure																																																	.																						.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.
		81	.	.	.	.	.																											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Query Sequence		R	L	N	L	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	E	T	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F	Y	P	R	Y	E	G	.	.	.	.	.	.	.	N	L	R	D	V	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.			.	.	.	.	.	.	.
Template Conservation																																																																		.
Template Sequence		A	L	G	L	G	F	D	A	M	N	S	N	T	F	S	D	A	P	G	Q	A	H	S	Y	K	Y	G	S	L	S	H	T	N	A	A	T	R	A	Q	A	V	E	H	N	L	E	C	I	E	I	G	K	A	I	G	S	K	A	L	T	V	W	I	G	.	D	G	S	N	F	P	G	Q	S	N	F	T	R	A	F
Template Known Secondary structure				T											S	S			T	T		S	S			T	T		S	T	T		S	S																						T										.				S	S	T	T	S	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.										.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																																										.
Query SS confidence																															.	.	.	.	.	.	.	.	.																																										.
Query Sequence		S	I	I	A	N	D	I	A	Y	V	R	E	T	Y	Q	D	S	G	L	T	F	T	I	E	Q	H	E	D	L	.	.	.	.	.	.	.	.	.	K	S	H	E	L	V	S	L	V	K	E	S	E	M	E	S	L	S	L	L	F	D	F	A	N	M	I	N	A	N	E	H	P	I	D	A	L	K	T	M	A	.
Query Conservation																															.	.	.	.	.	.	.	.	.																																										.
Alig confidence																		.													.	.	.	.	.	.	.	.	.														.												.																.
Template Conservation																		.																																			.												.
Template Sequence		E	R	Y	L	S	A	M	A	E	I	Y	K	G	L	P	D	.	D	W	K	L	F	S	E	H	K	M	Y	E	P	A	F	Y	S	T	V	V	Q	D	W	G	T	N	Y	L	I	A	Q	T	L	G	.	P	K	A	Q	C	L	V	D	L	G	H	.	H	A	P	N	T	N	I	E	M	I	V	A	R	L	I	Q
Template Known Secondary structure														T			T	.	T									S	S	S	S		S	S			T	T		S													.	T	T							G	G	G	.	S		T	T
Template Predicted Secondary structure																		.																																			.												.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
			198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.																																	.
Query SS confidence		.																																	.
Query Sequence		.	P	H	I	T	Q	V	H	I	K	D	A	L	I	V	K	E	P	G	G	L	G	H	K	A	C	I	S	G	Q	G	D	M	.	P	F	K	A	L	L	T	H	L	I	C	L	G	D	D	E	P
Query Conservation		.																																	.
Alig confidence		.											.	.	.	.	.	.	.																.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		F	G	K	L	G	G	F	H	F	N	D	.	.	.	.	.	.	.	S	K	Y	G	D	D	D	L	D	A	G	A	I	E	P	Y	R	L	F	L	V	F	N	E	L	V	D	A	E	A	R	G	V
Template Known Secondary structure		T	T									B	.	.	.	.	.	.	.		S	S	S	S			B		T	T	S	S																		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.								.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions