Job Description P32134 Confidence 51.98% Date Thu Jan 5 11:49:19 GMT 2012 Rank 273 Aligned Residues 98 % Identity 19% Template c1ktbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: the structure of alpha-n-acetylgalactosaminidase Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.		.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure									.								.	.	.	.	.	.	.	.																				.	.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.								.	.	.	.	.	.	.	.																				.	.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	Y	L	H	A	Y	.	A	F	H	L	N	M	R	.	.	.	.	.	.	.	.	L	E	R	V	L	P	A	D	L	L	D	I	A	S	E	N	N	L	R	.	.	G	V	K	I	H	V	L	D	G	E	R	F	S	L	.	.	.	.	.	.	.	.	.	.	.	G	N	M	D	D	K	E	L	S	A	F
Query Conservation									.								.	.	.	.	.	.	.	.																				.	.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.								.	.	.	.	.	.	.	.																				.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	M	G	W	L	A	W	E	R	F	R	C	N	V	N	C	R	E	D	P	R	Q	C	I	S	E	M	L	F	M	E	M	A	D	R	I	A	E	D	G	W	R	E	L	G	Y	K	Y	I	N	I	D	D	C	W	A	A	K	Q	R	D	A	E	G	R	L	V	P	D	P	E	R	F	P	R	G	I	K	A	L
Template Known Secondary structure							S					T	T				T	T	T		T	T	T	S	S	S														S	S					T								S	S		B		S	S			T	T	S				B		T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.											.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	K	A	R	R	L	N	L	D	I	H	I	.	.	.	.	.	.	.	.	.	.	E	T	S	A	S	D	K	A	S	I	D	E	A	V	A	I	A	L	K	T	G	A	S	S	V	R	F
Query Conservation															.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	Y	V	H	A	R	G	L	K	L	G	I	Y	G	D	L	G	R	L	T	C	G	G	Y	P	G	T	T	L	D	R	V	E	Q	D	A	Q	T	F	A	E	W	G	V	D	M	L	K	L
Template Known Secondary structure							T	T	T									B	S	S	B		T	T	S	S	B		B		G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions