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Job DescriptionP0A9S7
Confidence100.00%DateThu Jan 5 11:11:16 GMT 2012
Rank38Aligned Residues236
% Identity19%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SQPLLSVNGLMMRF. . GGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIAR
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Template Sequence  SGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQWRK
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SSTTS

TT

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S.TTSSSS
GG
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Query Sequence  MGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQ
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Template Sequence  A. FGVIPQKVFIFSG. TFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPG. . . . . . . . . . . KLDFVLVDGGCVLSHGHK
Template Known Secondary structure  G.S





SS.B
TTS
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TTTT
TTTGGGSTT...........GGG
B

TTTTTS
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Query Sequence  RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPE
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Template Sequence  QLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ. . . AFADCTVILCEARIEAMLECDQFLVIEENKVRQYDSIL
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   1352.......1360.........1370.........1380.........1390 .........1400.........1410.........1420........
 
   240...... ...250....
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Query Sequence  QIRNNPD. . VIRAYLGE
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Template Sequence  ELYHYPADRFVAGFIGS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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