Job Description P0A9S7 Confidence 98.60% Date Thu Jan 5 11:11:16 GMT 2012 Rank 91 Aligned Residues 216 % Identity 15% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.										.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence		V	N	L	E	L	Y	P	Q	E	I	V	S	L	I	G	P	N	G	A	G	K	T	T	V	F	N	C	L	T	G	F	Y	K	P	T	G	G	T	I	L	L	R	D	Q	H	L	E	G	L	P	G	Q	Q	I	A	R	M	G	V	V	R	T	F	Q	H	V	R	L	F	R	.	.	.	.	.	.	.	.	.	E
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence																																															.																									.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	.	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D
Template Known Secondary structure		S	S	S	S			T	T	S							S	T	T	S	S														T	T	T								S	S	.												T			G	G	G							S
Template Predicted Secondary structure																																															.
Template SS confidence
		1052	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.		.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																		.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		M	T	V	I	E	N	L	L	V	A	Q	H	Q	Q	L	K	T	G	L	F	S	G	L	L	K	T	P	S	F	R	R	A	Q	S	E	A	L	D	R	A	A	T	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	I	G	L	L	E	H	A	.	N	R	Q	A	S	N	L	A	Y
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G
Template Known Secondary structure					T	T	S	S									G	G	G											T	T																T	T	T											T	T						S														T
Template Predicted Secondary structure
Template SS confidence
		1131	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.
Predicted Secondary structure																		.	.																																																								.	.	.	.	.	.
Query SS confidence																		.	.																																																								.	.	.	.	.	.
Query Sequence		G	D	Q	R	R	L	E	I	A	R	C	M	V	T	Q	P	.	.	E	I	L	M	L	D	E	P	A	A	G	L	N	P	K	E	T	K	E	L	D	E	L	I	A	E	L	R	N	H	H	N	T	T	I	L	L	I	E	H	D	M	K	L	V	M	G	I	S	D	R	I	Y	V	V	.	.	.	.	.	.	N
Query Conservation																		.	.																																																								.	.	.	.	.	.
Alig confidence																		.	.											.																		.	.	.	.	.											.												.	.	.	.	.	.
Template Conservation																														.																		.	.	.	.	.											.
Template Sequence		E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	.	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	.	.	.	.	.	K	E	K	L	I	E	K	A	G	A	.	W	Y	S	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A
Template Known Secondary structure		T															S	S	S		T	T								.		T	T	T														.	.	.	.	.		T	T	S	S				T	T	.					T	T
Template Predicted Secondary structure																														.																		.	.	.	.	.											.
Template SS confidence
		1235	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.		.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.						1280	.	.	.	.	.	.	.	.	.		1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	T	P	L	A	N	G	T	P	E	Q	I	R	N	N	P	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V	R	E	L
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		1308	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions