Job Description P0A9S7 Confidence 100.00% Date Thu Jan 5 11:11:16 GMT 2012 Rank 27 Aligned Residues 236 % Identity 26% Template c2d2fA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:sufc protein; PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8 Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		L	S	V	N	G	L	M	M	R	F	G	G	L	L	A	V	N	N	V	N	L	E	L	Y	P	Q	E	I	V	S	L	I	G	P	N	G	A	G	K	T	T	V	F	N	C	L	T	G	F	Y	K	.	.	P	T	G	G	T	I	L	L	R	D	Q	H	L	E	G	L	P	G	Q	Q	I	A	R	M	G	V	V
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		L	E	I	R	D	L	W	A	S	I	D	G	E	T	I	L	K	G	V	N	L	V	V	P	K	G	E	V	H	A	L	M	G	P	N	G	A	G	K	S	T	L	G	K	I	L	A	G	D	P	E	Y	T	V	E	R	G	E	I	L	L	D	G	E	N	I	L	E	L	S	P	D	E	R	A	R	K	G	L	F
Template Known Secondary structure												T	T													T	T								S	S	S	S	S										T		T	T											T	T				T	T	S								T	T	B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		R	T	F	Q	H	V	R	L	F	R	E	M	T	V	I	E	N	L	L	V	A	Q	H	Q	Q	L	K	T	G	L	F	S	G	L	L	K	T	P	S	F	R	R	A	Q	S	E	A	L	D	R	A	A	T	W	L	E	R	I	G	L	L	E	.	.	H	A	N	R	Q	A	S	N	L	A	Y	G	D	Q	R	R
Query Conservation																																																																.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	F	Q	Y	P	V	E	V	P	G	V	T	I	A	N	F	L	R	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	Q	A	K	L	G	R	E	V	G	V	A	E	F	W	T	K	V	K	K	A	L	E	L	L	D	W	D	E	S	Y	L	S	R	Y	L	N	E	G	F	S	G	G	E	K	K	R
Template Known Secondary structure								T	T			S		B							.	.	.	.	.	.	.	.	.	.	.	.								T	S																			T			G	G	G	G	G	S	B	T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.													.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	E	I	A	R	C	M	V	T	Q	P	E	I	L	M	L	D	E	P	A	A	G	L	N	P	K	E	T	K	E	L	D	E	L	I	A	E	L	R	N	H	H	N	T	T	I	L	L	I	E	H	D	M	K	L	V	M	G	I	.	S	D	R	I	Y	V	V	N	Q	G	T	P	L	A	N	G	T	P	E	Q
Query Conservation																																																													.
Alig confidence																																									.																				.
Template Conservation																																									.
Template Sequence		N	E	I	L	Q	L	L	V	L	E	P	T	Y	A	V	L	D	E	T	D	S	G	L	D	I	D	A	L	K	V	V	A	R	G	V	N	A	M	R	.	G	P	N	F	G	A	L	V	I	T	H	Y	Q	R	I	L	N	Y	I	Q	P	D	K	V	H	V	M	M	D	G	R	V	V	A	T	G	G	P	E	L
Template Known Secondary structure													S							G	G	G	T	T																	.	B	T	T	B							S	S	S	G	G	G	G	T	S			S							T	T							S
Template Predicted Secondary structure																																									.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		241	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	N	N	P	D	V	I	R	A	Y	L	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	E	L	E	A	K	G	Y	E	W	L	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions