Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9S7
Confidence100.00%DateThu Jan 5 11:11:16 GMT 2012
Rank42Aligned Residues217
% Identity20%Templatec2cbzA_
PDB info PDB header:transportChain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10..... ....20.........30.........40.........50.........60.........70.........80...
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Query Sequence  LSVNGLMMRF. . GGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVV
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Template Sequence  ITVRNATFTWARSDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKG. . . . . . . . . . . . . . SVA
Template Known Secondary structure  S
TTS

S
TT

STTSSTT
S
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   644.....650.........660.........670.........680.........690.........700...... ...
 
   84.....90.........100.........110.........120.........130.........140... ......150........
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Query Sequence  RTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGL. . . . . LEHANRQASNLAYGD
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Template Sequence  YVPQQ. AWIQNDSLRENILFGCQLEEPYYR. . . . . . . . . . . . . . . . SVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQ
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STTS


TT................TT
TTSTTGGGSSTTSB


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   710.... .....720.........730........ .740.........750.........760.........770..
 
   159160.........170.........180.........190.........200 .........210.........220.........230.......
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Query Sequence  QRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELR. NHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGT
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Template Sequence  KQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYL. PQVDVIIVMSGGKISEMGS
Template Known Secondary structure 

SSTTTTS
TTSTTSTTTTS
S
STTG.GGSSTT
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   773......780.........790.........800.........810.........820.........830.. .......840.........850.
 
   238.240.........250....
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Query Sequence  PEQIRNNPDVIRAYLGE
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Template Sequence  YQELLARDGAFAEFLRT
Template Known Secondary structure  TS
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   852.......860........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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