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Job DescriptionP0A9S7
Confidence97.91%DateThu Jan 5 11:11:16 GMT 2012
Rank113Aligned Residues159
% Identity11%Templatec1szpC_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  LYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQ
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Template Sequence  VETGSITELFGEFRTGKSQLCHTLA. . . . . . . . . . . . . . . . VTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGL
Template Known Secondary structure  SSSSTTSS................TTS
TTTT

SSSSS


GGGGT

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   175....180.........190......... 200.........210.........220.........230........
 
   108.110.........120.........130.........140.........150.........160.........170.........180.......
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Query Sequence  QLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPK
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Template Sequence  DPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SLIVVDSVMALYREL
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GGG

STTTS
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TTGGG

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   239240.........250.........260.........270.... .....280.........
 
   188. 190.........200.........210...... ...220.........230.
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Query Sequence  ET. . . . . KELDELIAELRNHHNTTILLIEHDMKL. VMGISDRIYVVNQGT
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Template Sequence  SARQMHLAKFMRALQRLADQFGVAVVVTNQVGGNIMAHSSTTRLGFKKGK
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S

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   297..300.........310.........320.........330.........340......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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