Job Description P32152 Confidence 71.10% Date Thu Jan 5 11:49:32 GMT 2012 Rank 413 Aligned Residues 109 % Identity 15% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure														.															.	.	.	.
Query SS confidence														.															.	.	.	.
Query Sequence		L	N	E	R	Q	L	K	I	V	D	L	L	.	E	Q	Q	P	R	T	P	G	E	L	A	Q	Q	T	.	.	.	.	G	V	S	G	R	T	I	L	R	D	I	D	Y	L	N	F	T	L	N	G	K	A	R	I	F	A	S	G	S	A	G	Y	Q	L	E	I	F	E	R	R	S	F	F	Q	L	L	Q	K	H
Query Conservation														.															.	.	.	.
Alig confidence														.															.	.	.	.														.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		I	S	X	A	E	W	D	V	X	N	I	I	W	D	K	K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	.	.	.	.	L	Y	K	K	E	I	I	K	R	Y	K	S	E	N	I	Y	F	.	.	.	.	.	.	.	Y	S	S	N	I	K	E	D
Template Known Secondary structure																S	S	S												T	T	S														.	.	.	.				T	T	S							T	T				.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																														.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		D	N	D	D	R	L	L	A	L	L	L	L	N	T	F	.	T	P	R	A	Q	L	A	S	A	L	N	L	P	E	T	W	V	A	E	R	L	P	R	L	K	Q	R	Y	E	R
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		D	I	K	X	K	T	A	K	T	F	L	N	K	L	Y	G	G	D	X	K	S	L	V	L	N	F	A	K	N	E	E	L	N	N	K	E	I	E	E	L	R	D	I	L	N	D
Template Known Secondary structure																	T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions