Job Description P32152 Confidence 83.06% Date Thu Jan 5 11:49:32 GMT 2012 Rank 243 Aligned Residues 97 % Identity 7% Template d1pdnc_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain Resolution 2.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	R	Q	L	K	I	V	D	L	L	E	Q	Q	P	R	T	P	G	E	L	A	Q	Q	T	G	V	S	G	R	T	I	L	R	D	I	D	Y	L	N	F	T	L	N	G	K	A	R	I	F	A	S	G	S	A	G	Y	Q	L	E	I	F	E	R	R	S	F	F	Q	L	L	Q	K	H	D	N	D	D	R
Query Conservation
Alig confidence																																											.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	N	N	I	R	L	K	I	V	E	M	A	A	D	G	I	R	P	C	V	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	N	R	Y	Q	.	.	.	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	R	I	A	T	P	.	.	.	.	.	.	.	.	.	.	.	E	I	E	N	R
Template Known Secondary structure																T	T											T															.	.	.					S	S					S						S	S		S	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																											.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.												.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.								.	.	.	.	.	.	110	.	.
Predicted Secondary structure																						.	.	.			.	.	.	.	.	.	.
Query SS confidence																						.	.	.			.	.	.	.	.	.	.
Query Sequence		L	L	A	L	L	L	L	N	T	F	T	P	R	A	Q	L	A	S	A	L	.	.	.	N	L	.	.	.	.	.	.	.	P	E	T	W	V	A	E	R	L
Query Conservation																						.	.	.			.	.	.	.	.	.	.
Alig confidence																						.	.	.			.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	E	Y	K	R	S	S	P	G	M	F	S	W	E	I	R	E	K	L	I	R	E	G	V	C	D	R	S	T	A	P	S	V	S	A	I	S	R	L	V
Template Known Secondary structure					T	T	T	T		T	T													T	S	S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions