Job Description P32152 Confidence 94.75% Date Thu Jan 5 11:49:32 GMT 2012 Rank 102 Aligned Residues 86 % Identity 19% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	P	G	E	L	A	Q	Q	T	G	V	S	G	R	T	I	L	R	D	I	D	Y	L	N	F	T	L	N	G	K	A	R	I	F	A	S	G	S	A	G	Y	Q	L	E	I	F	E	R	R	S	F	F	Q	L	L	Q	K	H	D	N	D	D	R	L	L	A	L	L	L	L	N	T	F	T	P	R	A	Q	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	.	.	.	.	.	.	.	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	.	.	.	.	.	.	.	.	.	.	.	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I
Template Known Secondary structure												T	S										.	.	.	.	.	.	.		T	T	S	S						T	T	T				.	.	.	.	.	.	.	.	.	.	.			T	T														T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		98	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		A	S	A	L	N	L	P	E	T	W	.	.	.	.	.	.	V	A	E	R	L	P	R	L	K	Q	R	Y	E	R
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	A	F	G	V	T	L	S	A	K	E	W	K	Q	L	S	S	Q	W	R	E	E	L	D	R	R	I	H	T
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions